BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00027 (UTR included)
(3703 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1978_C1 1786 0.0
>BF14_1978_C1
Length = 1022
Score = 1786 bits (901), Expect = 0.0
Identities = 995/1023 (97%), Gaps = 10/1023 (0%)
Strand = Plus / Plus
Query: 2639 ttctttgcttaaaatgcaagagtcattgatgaagcctttgtcaagtagtagtccgatccc 2698
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 ttctttgcttaaaatgcaagagtcattaatgaagcctttgtcaagtagtagtccgatccc 60
Query: 2699 gtctaaagttggtctcgatcagaacatgttaatgaaaagtccccatgacctcattaaacc 2758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtctaaagttggtctcgatcagaacatgttaatgaaaagtccccatgacctcattaaacc 120
Query: 2759 atctaaggactatctgccccctgattttggaagtattaataaaacaaaaagtagttccca 2818
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 atctaaggactatctgccccctgattttggaagtatcaataaaacaaaaagtagttccca 180
Query: 2819 cgatcccataaaacacccggacgtgagctcgtctaaatcagagacttctaagtcggtttt 2878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 cgatcccataaaacacccggacgtgagctcgtctaaatcagagacttctaagtcggtctt 240
Query: 2879 atctgaatcacaactaccagaataccctcaaatttgctcctcgccaagggttgggggtga 2938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atctgaatcacaactaccagaataccctcaaatttgctcctcgccaagggttgggggtga 300
Query: 2939 tccatttttgaatcaaatgttggaattgactaagaagacgacgattcctgactatccggc 2998
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 301 tccatttttgaatcaaatgttggagttgactaagaagacgacgattcctgactatcctgc 360
Query: 2999 cgactacagccagccgcggaagatggatgaagatgtccagaagctaactccgacaaccct 3058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgactacagccagccgcggaagatggatgaagatgtccagaagctaactccgacaaccct 420
Query: 3059 ttcatactcaagcgccgctagcatagctgacactatagcccaggttgcgatgggaaattt 3118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatactcaagcgccgctagcatagctgacactatagcccaggttgcgatgggaaattt 480
Query: 3119 taataaaatggaagatgccatggactattctactggtcaagattattcaactacgaaaaa 3178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taataaaatggaagatgccatggactattctactggtcaagattattcaactacgaaaaa 540
Query: 3179 tacaagcagtgaaacagaaaattaatgctatgacttagtaattgaaaaaatctttttagt 3238
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 541 tacaagcagtgaaacagaaaattaatgctatgacttattaattgaaaaaatcttttgagt 600
Query: 3239 tacatgtgcttagtattatatatatttcataaatttaaagcaatctaaaaaaaaa-ttca 3297
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 601 tacatgtgcttagtattatatatatttcataaatttaaagcagtctaaaaaaaaatttca 660
Query: 3298 aattaaagtccgaaaagttttgttcatatttaaatagtaattaagtcatctatttgttat 3357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aattaaagtccgaaaagttttgttcatatttaaatagtaattaagtcatctatttgttat 720
Query: 3358 ttgcgattcgcgctagattttatcagtgaaaaattacttaaaaaaa-------tactaga 3410
||||||||||||||||||||||||||| |||||||||||||| |||| ||
Sbjct: 721 ttgcgattcgcgctagattttatcagt-tttcattacttaaaaaaaaaaaaattacttga 779
Query: 3411 taat-aatatactctaagtatcgcttccttttgtaatgaagaaatcacggtcgccgataa 3469
|||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 780 taatggatataccttaagtatcgcttccttttgtaatgaagaaatcacggtcgctgataa 839
Query: 3470 ggaattattgataaacactgataggctaatcagtgataataattatgatgacgctataac 3529
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 840 ggaattattgataaacactgataggctaatcagtgataataattattatgacgctataac 899
Query: 3530 tgaataacaataataatttatttttatatcggcattgtgtttttgtgcaaacacgtgaaa 3589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tgaataacaataataatttatttttatatcggcattgtgtttttgtgcaaacacgtgaaa 959
Query: 3590 taagctgcgctgaattacaaaaaagtttttattgtgattctattagtgatgttgattttg 3649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 taagctgcgctgaattacaaaaaagtttttattgtgattctattagtgatgttgattttg 1019
Query: 3650 tga 3652
|||
Sbjct: 1020 tga 1022
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 443,594
Number of extensions: 8663
Number of successful extensions: 8663
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8662
Number of HSP's successfully gapped: 2
Length of query: 3703
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3685
Effective length of database: 8,109,745
Effective search space: 29884410325
Effective search space used: 29884410325
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)