BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00036 (UTR included)
(1651 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2H03 230 6e-60
BF14_1869_C1 86 2e-16
>BF01037B2H03
Length = 830
Score = 230 bits (116), Expect = 6e-60
Identities = 210/238 (88%), Gaps = 5/238 (2%)
Strand = Plus / Minus
Query: 154 tacacatcaacaatgtctagggatattatatgaaaggcttcttaacttaaaaaatattta 213
|||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||
Sbjct: 530 tacacatcaacaatgtctagggatattacgtgaaagatttcttaacttaaaaacttttta 471
Query: 214 ctgtataaaaaaaaagtttgtatttaaaatattttcttctccaccacttctttccaaatt 273
| |||| |||||| |||| ||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 470 atatatacaaaaaa-gtttatatataaaatattttattctccac-acttctttccaaatt 413
Query: 274 caaaaaaagaaaaaaaaaactcgttttcaaacaaaagaatgtcgattattcgaatttggc 333
|||||||| |||||||| || |||| |||||||||||||||| | | |||||||||||
Sbjct: 412 caaaaaaataaaaaaaa---tcattttaaaacaaaagaatgtcggtaactcgaatttggc 356
Query: 334 gatcgaaaatttacttcatgttacaataaaacagtgaagttctgaaaaattaaaagtg 391
||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 355 cgtcgaaaagttagttcatgttaaaataaaacagtgaagttctgaaaaattaaaagtg 298
>BF14_1869_C1
Length = 761
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 27 cctctagggaggaatagagttcgcccggtcagctatacatatattaataatgccgaaatt 86
|||||||| |||| ||||||| |||||||||||||| |||| ||| ||| ||||||||
Sbjct: 538 cctctaggttggaaaagagttctcccggtcagctataaatatgttactaacaccgaaatt 479
Query: 87 aacgcggacgtagtcgcgggcaaaaac 113
||||| |||| ||||||||||||||||
Sbjct: 478 aacgcagacgaagtcgcgggcaaaaac 452
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,926
Number of extensions: 5169
Number of successful extensions: 5169
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5166
Number of HSP's successfully gapped: 2
Length of query: 1651
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1634
Effective length of database: 8,119,229
Effective search space: 13266820186
Effective search space used: 13266820186
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)