BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00040 (UTR included)
(2580 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2G03 1348 0.0
BF01052B1A05 1005 0.0
>BF01013A2G03
Length = 824
Score = 1348 bits (680), Expect = 0.0
Identities = 686/688 (99%)
Strand = Plus / Minus
Query: 1382 caggattgtaacagtcaaaacgcatgttccagcagcgtacagatcgataataaaatcgta 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 caggattgtaacagtcaaaacgcatgttccagcagcgtacagatcgataataaaatcgta 765
Query: 1442 cgattcctcttactgaagagcgaagaagtatttacaacagatttgctcgaatctctctct 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 cgattcctcttactgaagagcgaagaagtatttacaacagatttgctcgaatctctctct 705
Query: 1502 tcactcataataaaccagccgcctgacggaaggcggagcaagaagctcctagacatgctc 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tcactcataataaaccagccgcctgacggaaggcggagcaagaagctcctagacatgctc 645
Query: 1562 tcgaaatacgaaggtctgagagtctgcgacgtgtctagtgacataatagaaaacatgact 1621
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 644 tcgaaatacgaaggtctgagagtctgcgacgtgtctagtgatataatagaaaacatgact 585
Query: 1622 ctgttcacgtcagtgaacaacgaaggagacgaagcgtcccgacacgcgaacgaaatctcc 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctgttcacgtcagtgaacaacgaaggagacgaagcgtcccgacacgcgaacgaaatctcc 525
Query: 1682 gaatctgcgatactgcaggacgtagccgggtcattgaacttgttcagttcgagcgagact 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaatctgcgatactgcaggacgtagccgggtcattgaacttgttcagttcgagcgagact 465
Query: 1742 cagctacatcagattaacacgtgtccgtacatgtggcccggtcacgtacacgtggacatt 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cagctacatcagattaacacgtgtccgtacatgtggcccggtcacgtacacgtggacatt 405
Query: 1802 aacgacagtccccgctcgagtcaagaagggaaggtcgatctcatcaactgctcggatatg 1861
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aacgacagtccccgttcgagtcaagaagggaaggtcgatctcatcaactgctcggatatg 345
Query: 1862 cacaatggcgacttggccgaagccgatcagacttgccgcaccgacatagaagacggacaa 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cacaatggcgacttggccgaagccgatcagacttgccgcaccgacatagaagacggacaa 285
Query: 1922 acacataacgaactggccggaaatgacgctctaccggatgtcgttgacacggacgaggtg 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acacataacgaactggccggaaatgacgctctaccggatgtcgttgacacggacgaggtg 225
Query: 1982 acgcccacagaggccgaagctgagtggttcgggcttgaccgtgtgccaacaaggctgcat 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 acgcccacagaggccgaagctgagtggttcgggcttgaccgtgtgccaacaaggctgcat 165
Query: 2042 atggaagaaacatctgaaaagcagaaag 2069
||||||||||||||||||||||||||||
Sbjct: 164 atggaagaaacatctgaaaagcagaaag 137
Score = 262 bits (132), Expect = 3e-69
Identities = 136/138 (98%)
Strand = Plus / Minus
Query: 2234 agagtagggtcaaggagtaagtcgtcatggtcttttccaactcaatgtatctaatattgt 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 agagtagggtcaaggagtaagtcgtcatggtcttttccaactcaatgtatctaatattgt 79
Query: 2294 aaaattctttaatacttttcattgactgtcaatatttacatagtttcctttctgtaatat 2353
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 78 aaaattctttaatacttttcattgactgtcaatatttacatagnntcctttctgtaatat 19
Query: 2354 ttattgaaaataaataaa 2371
||||||||||||||||||
Sbjct: 18 ttattgaaaataaataaa 1
>BF01052B1A05
Length = 770
Score = 1005 bits (507), Expect = 0.0
Identities = 513/515 (99%)
Strand = Plus / Plus
Query: 1480 agatttgctcgaatctctctcttcactcataataaaccagccgcctgacggaaggcggag 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatttgctcgaatctctctcttcactcataataaaccagccgcctgacggaaggcggag 60
Query: 1540 caagaagctcctagacatgctctcgaaatacgaaggtctgagagtctgcgacgtgtctag 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagaagctcctagacatgctctcgaaatacgaaggtctgagagtctgcgacgtgtctag 120
Query: 1600 tgacataatagaaaacatgactctgttcacgtcagtgaacaacgaaggagacgaagcgtc 1659
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatataatagaaaacatgactctgttcacgtcagtgaacaacgaaggagacgaagcgtc 180
Query: 1660 ccgacacgcgaacgaaatctccgaatctgcgatactgcaggacgtagccgggtcattgaa 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgacacgcgaacgaaatctccgaatctgcgatactgcaggacgtagccgggtcattgaa 240
Query: 1720 cttgttcagttcgagcgagactcagctacatcagattaacacgtgtccgtacatgtggcc 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgttcagttcgagcgagactcagctacatcagattaacacgtgtccgtacatgtggcc 300
Query: 1780 cggtcacgtacacgtggacattaacgacagtccccgctcgagtcaagaagggaaggtcga 1839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggtcacgtacacgtggacattaacgacagtccccgctcgagtcaagaagggaaggtcga 360
Query: 1840 tctcatcaactgctcggatatgcacaatggcgacttggccgaagccgatcagacttgccg 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctcatcaactgctcggatatgcacaatggcgacttggccgaagccgatcagacttgccg 420
Query: 1900 caccgacatagaagacggacaaacacataacgaactggccggaaatgacgctctaccgga 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caccgacatagaagacggacaaacacataacgaactggccggaaatgacgctctaccgga 480
Query: 1960 tgtcgttgacacggacgaggtgacgcccacagagg 1994
|||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtcgttgacacggacgaggtgacgcccacagagg 515
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,926
Number of extensions: 5214
Number of successful extensions: 5214
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5214
Number of HSP's successfully gapped: 3
Length of query: 2580
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2563
Effective length of database: 8,119,229
Effective search space: 20809583927
Effective search space used: 20809583927
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)