BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00042 (UTR included)
(1375 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2H05 686 0.0
>BF01062B2H05
Length = 394
Score = 686 bits (346), Expect = 0.0
Identities = 355/358 (99%)
Strand = Plus / Plus
Query: 535 ccgcgatcaatgaagtcgtgacgcgggaatacactgttaatttacacaaacgactacatg 594
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ccgcgatcaatgaagtcgtgacgcgggaatacactgttaatttacacaaacggctacatg 60
Query: 595 gagttggttttaagaaacgcgctccccgtgctatcaaggaaatccgtaaattcgccgaaa 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagttggttttaagaaacgcgctccccgtgctatcaaggaaatccgtaaattcgccgaaa 120
Query: 655 aacaaatgggtaccccagacgttcgtgttgacaccaggttaaacaaattcctgtggtcca 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacaaatgggtaccccagacgttcgtgttgacaccaggttaaacaaattcctgtggtcca 180
Query: 715 agggtgtaaggaatgttcccttcagagtgcgtgtaaggctctcccgcagacgtaatgacg 774
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggtgtaaggaatgttcccttcagagtgcgtgtaaggctctcccgcagacgtaatgacg 240
Query: 775 atgaggactcggcacacaaactgttcaccctagtgacatatgtacccgttgcatccatca 834
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgaggactcggcccacaaactgttcaccctagtgacatatgtacccgttgcatccatca 300
Query: 835 agggcttgcaaactgagaatgttgatgctagccaagaataaacattaagttaagctta 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggcttgcaaactgagaatgttgatgctagccaagaataaacattaagttaagctta 358
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,024
Number of extensions: 4559
Number of successful extensions: 4559
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4559
Number of HSP's successfully gapped: 1
Length of query: 1375
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1358
Effective length of database: 8,119,229
Effective search space: 11025912982
Effective search space used: 11025912982
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)