BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00047 (UTR included)
(3466 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2A11 613 e-175
BF01011A1B07 172 2e-42
>BF01039B2A11
Length = 820
Score = 613 bits (309), Expect = e-175
Identities = 330/337 (97%)
Strand = Plus / Plus
Query: 2549 agctacaaagatagtgtcgtatgctaaaggctacctagtccgtcgtttgatgagcacgga 2608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 agctacaaagatagtgtcgtatgctaaaggctacctagtccgtcgtttgatgagcacgga 108
Query: 2609 gcgcgtccaggccaccgtgcagacaatcaaagacgcgctgctgtgcgccctccagctgca 2668
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 109 gcgcgtccaggccaccgtgcagacaatcaaggacgcgctactgtgcgccctccagctgca 168
Query: 2669 ccaggagcgggagggcatccgtggggcggatgtagacctgcaccggcggctcatacagca 2728
|||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 169 ccaggaacgggagggcatccgtggggcggatgtagatctgcaccggcgactcatacagca 228
Query: 2729 gataacagctgcgtgttactccctgcacgacaccttcatcaccagctcgtcgtcggagcg 2788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gataacagctgcgtgttactccctgcacgacaccttcatcaccagctcgtcgtcggagcg 288
Query: 2789 ctgcgctctgatcgccgcggaccgcagccggcgccgctcgctggccgcccgccttcccac 2848
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctgtgctctgatcgccgcggaccgcagccggcgccgctcgctggccgcccgccttcccac 348
Query: 2849 ccccccccccacccccccacacagacatcgacacacg 2885
|||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccccacccccacccccccacacagacatcgacacacg 385
>BF01011A1B07
Length = 881
Score = 172 bits (87), Expect = 2e-42
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 2786 gcgctgcgctctgatcgccgcggaccgcagccggcgccgctcgctggccgcccgccttcc 2845
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 gcgctgtgctctgatcgccgcggaccgcagccggcgccggtcgctggccgcccgccttcc 60
Query: 2846 cacccccccccccacccccccacacagacatcgacacac 2884
||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cacccccacccccacccccccacacagacatcgacacac 99
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 358,407
Number of extensions: 6478
Number of successful extensions: 6478
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6478
Number of HSP's successfully gapped: 2
Length of query: 3466
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3448
Effective length of database: 8,109,745
Effective search space: 27962400760
Effective search space used: 27962400760
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)