BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00050 (UTR included)
(3202 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A2G12 571 e-162
BF14_643_C2 186 1e-46
>BF01018A2G12
Length = 762
Score = 571 bits (288), Expect = e-162
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 668 ggcgtacgagcgtcgtttcccaaactgtccccagatcccggtcgtgatagactgtgtgat 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggcgtacgagcgtcgtttcccaaactgtccccagatcccggtcgtgatagactgtgtgat 534
Query: 728 cacggaggacagctggtccgcagacgactcccagcgacagaccaccagaagatgtcagct 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cacggaggacagctggtccgcagacgactcccagcgacagaccaccagaagatgtcagct 594
Query: 788 caacgtggacgcgccctacctgctcaagaagatgatcggtgtggattatatttacttcat 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 caacgtggacgcgccctacctgctcaagaagatgatcggtgtggattatatttacttcat 654
Query: 848 ccaaaagaatcatctggatctgaagagtcgtgtgctggagatagaagccaccaacgagac 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ccaaaagaatcatctggatctgaagagtcgtgtgctggagatagaagccaccaacgagac 714
Query: 908 cttcgcctccagggtctcggtcgttgaaaactgtcgctatttcgtaca 955
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cttcgcctccagggtctcggtcgttgaaaactgtcgctatttcgtaca 762
>BF14_643_C2
Length = 868
Score = 186 bits (94), Expect = 1e-46
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 3090 atggtaggtagatagaaaaattaactaaaaatctgcaaaataagccgcagcacacagcgt 3149
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 1 atggtaggtagatagaaaaattaaataaaaatctgcaaaataagccgcagcatacagcgt 60
Query: 3150 gcagcccgaaatatatttaggaaaaatatggatatatatttatgattata 3199
||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 61 gcagcccgaaatatatttagggaaaatatagatatatatttatgattata 110
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,141
Number of extensions: 5066
Number of successful extensions: 5066
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5066
Number of HSP's successfully gapped: 2
Length of query: 3202
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3184
Effective length of database: 8,109,745
Effective search space: 25821428080
Effective search space used: 25821428080
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)