BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00054 (UTR included)
(2266 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2G04 1386 0.0
>BF01014B2G04
Length = 771
Score = 1386 bits (699), Expect = 0.0
Identities = 753/771 (97%)
Strand = Plus / Plus
Query: 437 aaacatataaacataagcacgtgtattgaattaagaagacttttcgtaatgagtatgaga 496
|||||| || ||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 1 aaacatctatacataagcacgtgtattaaattaagaagacttttcgtaatgattatgaga 60
Query: 497 aaatatggatgcttacgatatatttaagaaactgaccaagggtttgacttttaagcatcg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatatggatgcttacgatatatttaagaaactgaccaagggtttgacttttaagcatcg 120
Query: 557 cgtcttgggagtaaaaaacaaagatgagcctattaaatcaagtttaaaaaatgaagttat 616
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 121 cgtcttgggagtaaaaaacaaagattagcctattaaatcaagtttaaaaaatgaagatat 180
Query: 617 caaagaagaacgtgatattaaagaggagattgagagttgttcagataatgaagagtcaag 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaagaagaacgtgatattaaagaggagattgagagttgttcagataatgaagagtcaag 240
Query: 677 tgtaccccagacggattcagaacaagatgtcagtgaccccgaactacaaattatagaagg 736
||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| |||
Sbjct: 241 tgtacaccagacggattcggaacaagatgtcagtgaccccgaactacaagttataggagg 300
Query: 737 tgacaagggtcagtcgacaagaaaagaaaagaaaaagaaatcaaaattaactcctgaaga 796
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 301 tgacaagggtcagtcgacaagaagagaaaagaaaaagaaatcaaaattaagtcctgaaga 360
Query: 797 gttacaaaagaagctggaactagaagagcaaaaccatttccgtaatgagcatgggataaa 856
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 gttacaaaagaagctggaactagaagagcaaaaccatttccgtaatgagcacgggataaa 420
Query: 857 agcagttggccgtcacattcctaacgcattaagagacttcaacgaactgattacaaagta 916
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 421 agcagttggccgtcacattcctaacgcattgagagacttcaatgaactgattacaaagta 480
Query: 917 taatatatccccgtcaatggtggaagtgcttttacagtgtggttactctgaacccacacc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taatatatccccgtcaatggtggaagtgcttttacagtgtggttactctgaacccacacc 540
Query: 977 cattcaacgtcaagctgtaccatgtttattggagaatcgtcaaatcgtagcctgtgctcc 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cattcaacgtcaagctgtaccatgtttattggagaatcgtcaaatcgtagcctgtgctcc 600
Query: 1037 gactggatctggtaagacagcagcattcttaatgcctctcttacacatgctcggagctcc 1096
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 601 gactggatctggtaagacagcagcattcctaatgcctctgttacacatgctcggagctcc 660
Query: 1097 tcaaggcggtccgagagccctggtgctttgtcccaccagagaactggcaaaccagatata 1156
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 661 tcaaggcggtccgagagccctggtgctctgtcccaccagagaactggcaaaccagatata 720
Query: 1157 ccgcgaggccataagactctcggcatccactcagttgagatgctcagtcat 1207
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgcgaggccataagactctcggcatccactcagttgagatgctcagtcat 771
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,004
Number of extensions: 4464
Number of successful extensions: 4464
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4464
Number of HSP's successfully gapped: 1
Length of query: 2266
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2249
Effective length of database: 8,119,229
Effective search space: 18260146021
Effective search space used: 18260146021
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)