BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00068 (UTR included)
(3136 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_446_C1 1497 0.0
>BF14_446_C1
Length = 1300
Score = 1497 bits (755), Expect = 0.0
Identities = 776/783 (99%)
Strand = Plus / Plus
Query: 2354 cactgtatggtacgagctgctgtgcggtgaatatcccttcaagggccagcctcctgaggc 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cactgtatggtacgagctgctgtgcggtgaatatcccttcaagggccagcctcctgaggc 492
Query: 2414 ggtcatctggcaggtcggcaagggagtgaagcagtccttgaacaacatgcaagcctctag 2473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggtcatctggcaggtcggcaagggagtgaagcagtccttgaacaacatgcaagcctctag 552
Query: 2474 agatatcaaagacatccttatgctctgctgggcttaccgatcaagtgagcggccagactt 2533
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 553 agatatcaaagacatccttatgctctgctgggcttaccgatcaagtgagcgaccagactt 612
Query: 2534 tccgcacttgttgtcaactctggagaagctgccaaggaagagactggctcgctcgccctc 2593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tccgcacttgttgtcaactctggagaagctgccaaggaagagactggctcgctcgccctc 672
Query: 2594 acatcctgttcatctgtcacgatcagctgactcagtgttctgagacatggtgtgctgtaa 2653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 acatcctgttcatctgtcacgatcagctgactcagtgttctgagacatggtgtgctgtaa 732
Query: 2654 tgtacttcatcagaggcaccggctcgtgcatccctctgtgatttacttaacctgtgcgac 2713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tgtacttcatcagaggcaccggctcgtgcatccctctgtgatttacttaacctgtgcgac 792
Query: 2714 cccagtgatcttatggatactttttagacgtctgtgtctgtcacaaaatcgtttattcct 2773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cccagtgatcttatggatactttttagacgtctgtgtctgtcacaaaatcgtttattcct 852
Query: 2774 atcatttcaggagtcgccctgcctaagtcccagagtgacagtgtgattgtattgcgagat 2833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 853 ctcatttcaggagtcgccctgcctaagtcccagagtgacagtgtgattgtattgtaagat 912
Query: 2834 aatttaaacgtaacccactcaagattctgtgaagctagttggtagttgtttgtttttatt 2893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 aatttaaacgtaacccactcaagattctgtgaagctagttggtagttgtttgtttttatt 972
Query: 2894 tctggccgcaatcaaacatactgaacgatttatacattgaacattgtgctgattagagag 2953
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 973 tctggccgcaatcaaacatactgaacgatttatacattgaacattatactgattagagag 1032
Query: 2954 aaaccgtggatcatgctagtatttcaataaaatagatgtaaaagctatcattagattatc 3013
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 gaaccgtggatcatgctagtatttcaataaaatagatgtaaaagctatcattagattatc 1092
Query: 3014 agggatttcaattaatattcaaaaagtttaattctcctctgaaaactattcaataattat 3073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 agggatttcaattaatattcaaaaagtttaattctcctctgaaaactattcaataattat 1152
Query: 3074 aagagttatttataaaaatgctaacggaagagaaaatactgagaaacggtcaattgaaag 3133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 aagagttatttataaaaatgctaacggaagagaaaatactgagaaacggtcaattgaaag 1212
Query: 3134 atc 3136
|||
Sbjct: 1213 atc 1215
Score = 565 bits (285), Expect = e-160
Identities = 297/301 (98%)
Strand = Plus / Plus
Query: 2054 tcgccacgagaacctggtgctgttcatgggcgcgtgtatgaagccacctcgcctggccat 2113
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tcgccacgagaacctggtgctgttcatgggcgcttgtatgaagccacctcgcctggccat 60
Query: 2114 cgtgacgtcactgtgtaagggcatgacgctgtacacacacatccacctcaggaaggacaa 2173
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 cgtgacgtcactgtgtaagggcatgacgctctacacacacatccacctcaggaaggacaa 120
Query: 2174 gttcaccgccaacaagagcgtcatcgtcgcacagcagatatcacagggcatgggttactt 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcaccgccaacaagagcgtcatcgtcgcacagcagatatcacagggcatgggttactt 180
Query: 2234 gcacgctcggggcatcgtgcacaaggatctgaagacgaagaatatattcttggagaatgg 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcacgctcggggcatcgtgcacaaggatctgaagacgaagaatatattcttggagaatgg 240
Query: 2294 aaaagtcgtcatcacagacttcggactgttcagcgtcaccaagctgtgttttggcaacaa 2353
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 241 aaaagtcgtcatcacagacttcgggctgttcagcgtcaccaagctgtgtttcggcaacaa 300
Query: 2354 c 2354
|
Sbjct: 301 c 301
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,872
Number of extensions: 6593
Number of successful extensions: 6593
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6593
Number of HSP's successfully gapped: 2
Length of query: 3136
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3118
Effective length of database: 8,109,745
Effective search space: 25286184910
Effective search space used: 25286184910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)