BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00072 (UTR included)
(1798 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1688_C1 1600 0.0
>BF14_1688_C1
Length = 1333
Score = 1600 bits (807), Expect = 0.0
Identities = 877/905 (96%), Gaps = 24/905 (2%)
Strand = Plus / Plus
Query: 398 ttgtagtgtgctcgagtgatttatatattaggaatcttaatttattattagattgattga 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ttgtagtgtgctcgagtgatttatatattaggaatcttaatttattattagattgattga 62
Query: 458 gtgttaatcactaaacgtttcttgtttattttaagtactcaacatgtcagacagagagag 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gtgttaatcactaaacgtttcttgtttattttaagtactcaacatgtcagacagagagag 122
Query: 518 gagccgttcgaggacccgcaacgggtctagggagccggcgccaaagcctgcggtcatgtc 577
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gagccgctcgaggacccgcaacgggtctagggagccggcgccaaagcctgcggtcatgtc 182
Query: 578 tcgtggccatagccggagccggtctcgcacgcctcccccgccaaaagcatccagtaggaa 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcgtggccatagccggagccggtctcgcacgcctcccccgccaaaagcatccagtaggaa 242
Query: 638 gtacagaagcccgtctcgctcgaggtcggggtccgctcgtcgttaccgcggcagccgcta 697
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 243 gtacagaagcccgtctcgctcgaggtcggggtccgctcgtcgctaccgcggcagccgcta 302
Query: 698 ctctcgctcccgctcccggtcgtactcgccccgcggctcctatcgccgctcacactcgca 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctctcgctcccgctcccggtcgtactcgccccgcggctcctatcgccgctcacactcgca 362
Query: 758 tagcccgatgtcgtctcgtagacggcatctcggtgatcg------------ggaaaatcc 805
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 363 tagcccgatgtcgtctcgtagacggcatctcggtgatcgggtgaggcttttggaaaatcc 422
Query: 806 gactccatcgagatgtctcggagtgttcggtctcagtctctacactactgaacagcaaat 865
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gacgccatcgagatgtctcggagtgttcggtctcagtctctacactactgaacagcaaat 482
Query: 866 tcatcacatattttcaaaatttggaccagttgacaaagttcaagttgtgattgatgccaa 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcatcacatattttcaaaatttggaccagttgacaaagttcaagttgtgattgatgccaa 542
Query: 926 gactggacgctcccgtggtttttgcttcgtgtatttcgagtcccaggacgacgccaaggt 985
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gactggacgctcccgcggtttttgcttcgtgtatttcgagtcccaggacgacgccaaggt 602
Query: 986 ggcgaagaacgagtgtactggcatggagatagacggacgtcgcatacgagtagactactc 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ggcgaagaacgagtgtactggcatggagatagacggacgtcgcatacgagtagactactc 662
Query: 1046 catcacacagagagctcacacacccacaccgggcatatacatggggaaacccacgcatgt 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 catcacacagagagctcacacacccacaccgggcatatacatggggaaacccacgcatgt 722
Query: 1106 aagaggagataacggctacgacagacgcagagacagaga------------cgactacta 1153
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 723 aagaggagataacggctacgacagacgcagagacagagatcccgcccacagcgactacta 782
Query: 1154 ctaccgcggcggcggctaccgcgagcgcgagcgcgactactacgcccgcggctaccgaca 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ctaccgcggcggcggctaccgcgagcgcgagcgcgactactacgcccgcggctaccgaca 842
Query: 1214 ccgctcgccgtcccctcactaccgccggcgccgctacgagcgcgagcgctcctactcgcc 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ccgctcgccgtcccctcactaccgccggcgccgctacgagcgcgagcgctcctactcgcc 902
Query: 1274 gcgta 1278
|||||
Sbjct: 903 gcgta 907
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,220
Number of extensions: 4450
Number of successful extensions: 4450
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4448
Number of HSP's successfully gapped: 3
Length of query: 1798
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1781
Effective length of database: 8,119,229
Effective search space: 14460346849
Effective search space used: 14460346849
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)