BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00084 (UTR included)
(6805 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B2C11 1562 0.0
BF14_2284_C1 143 4e-33
>BF01044B2C11
Length = 797
Score = 1562 bits (788), Expect = 0.0
Identities = 794/797 (99%)
Strand = Plus / Plus
Query: 108 ttctcacttatttggagtggtttgtgaaatgtgaccattgtttttactgaacacgtactt 167
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ttctcacttatttggagtggtttgtgaaatnnnaccattgtttttactgaacacgtactt 60
Query: 168 tagttacaagtttaaataaaagttaagtatatgttaaggacagtttgaattagttactcg 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagttacaagtttaaataaaagttaagtatatgttaaggacagtttgaattagttactcg 120
Query: 228 tagttaccgtccaattgtacaacgaaaagctcgtataatatttcgaacagaaggtgaatt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagttaccgtccaattgtacaacgaaaagctcgtataatatttcgaacagaaggtgaatt 180
Query: 288 cgggcgtcgaccggtccatccctcctacttgtaaccgttgctgtcactcgtgtcagtcca 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggcgtcgaccggtccatccctcctacttgtaaccgttgctgtcactcgtgtcagtcca 240
Query: 348 aatcgtcatttcgtacgtgtcgtgctaccgggtaagacgagcatttcggtggtttccaac 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcgtcatttcgtacgtgtcgtgctaccgggtaagacgagcatttcggtggtttccaac 300
Query: 408 aacgtgttgtgtagtgtcggtctgtgggaccgtttaatgtggtattcagtgccggtgtta 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacgtgttgtgtagtgtcggtctgtgggaccgtttaatgtggtattcagtgccggtgtta 360
Query: 468 gggtatcgcaagggtcgcgcgtgattcggcgcgatggtggatatggataggaacgacccg 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggtatcgcaagggtcgcgcgtgattcggcgcgatggtggatatggataggaacgacccg 420
Query: 528 gagctccggtacctgtcggtcgatcggaacagtttcaacgaccccgcgacgcaggccgaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagctccggtacctgtcggtcgatcggaacagtttcaacgaccccgcgacgcaggccgaa 480
Query: 588 tggactcagaagagactagtgtgggtgccccatgagactcatggcttcgtggccgctggc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggactcagaagagactagtgtgggtgccccatgagactcatggcttcgtggccgctggc 540
Query: 648 atcaagggcgagcggagggatgaagtggaagtggagatcgcggagtccgggaagcggatg 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcaagggcgagcggagggatgaagtggaagtggagatcgcggagtccgggaagcggatg 600
Query: 708 ttggtgcccatcgacgacatccagaagatgaacccgcccaagttcgacaaagtcgaggac 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttggtgcccatcgacgacatccagaagatgaacccgcccaagttcgacaaagtcgaggac 660
Query: 768 atggctgagctcacctgcttaaatgaagcctccgttcttcacaacatcaaagacagatac 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atggctgagctcacctgcttaaatgaagcctccgttcttcacaacatcaaagacagatac 720
Query: 828 tactccggattgatatatacatactctggtctcttctgcgtggtggtcaatccgtacaag 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tactccggattgatatatacatactctggtctcttctgcgtggtggtcaatccgtacaag 780
Query: 888 aagctgccgatctacac 904
|||||||||||||||||
Sbjct: 781 aagctgccgatctacac 797
>BF14_2284_C1
Length = 1180
Score = 143 bits (72), Expect = 4e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 6206 agagctggacgacctactggaagcgcaggagacgctctccagggagtgcaccaacctgcg 6265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagctggacgacctactggaagcgcaggagacgctctccagggagtgcaccaacctgcg 60
Query: 6266 caacaaactcag 6277
||||||||||||
Sbjct: 61 caacaaactcag 72
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 74,885
Number of extensions: 8688
Number of successful extensions: 8688
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8688
Number of HSP's successfully gapped: 2
Length of query: 6805
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6787
Effective length of database: 8,109,745
Effective search space: 55040839315
Effective search space used: 55040839315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)