BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00086 (UTR included)
(1228 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A2D06 1473 0.0
>BF01027A2D06
Length = 782
Score = 1473 bits (743), Expect = 0.0
Identities = 771/782 (98%)
Strand = Plus / Plus
Query: 54 gtcgaggaaactcttatagggggcttatcgaagagttttcccagtcacaagtttattggg 113
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtcgaggaaactcttatagggggcttatcgaaganntttcccagtcacaagtttattggg 60
Query: 114 gaagaatctgttgccagcggagacaaatgtatactttcagaagatcctacatggatcatc 173
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 gaagaatctgttgctagcggagacaaatgtatactttcagacgatcctacatggatcatc 120
Query: 174 gaccccgtcgatggaacccttaattttattcatggctatccttgtagctgcatatctgtt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccccgtcgatggaacccttaattttattcatggctatccttgtagctgcatatctgtt 180
Query: 234 ggtctggccataaacaaaaaggttgttgctggtatcatatacaatcctgtcttaaaccaa 293
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 ggtctggccataaacaaaaaggttgtagctggtatcatatacaatcctgtcttaaaccaa 240
Query: 294 ttattcacagctattgaaggtaaaggtgctttccttaacagtacacctatacatgtctcc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttattcacagctattgaaggtaaaggtgctttccttaacagtacacctatacatgtctcc 300
Query: 354 caggtcaaggagctgagaaatgctctaatatcattagaagctgggactagccgtgacgaa 413
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 301 caggtcaaggagctgagaaatgctctaatatcatttgaagctgggactagtcgtgacgaa 360
Query: 414 gagagacagaaactggtgttagagaattttaaattaataactacaaagggacaaggtgtc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagagacagaaactggtgttagagaattttaaattaataactacaaagggacaaggtgtc 420
Query: 474 agatgtttaggatctgcggctttaaatatggccatggttgcaatgggtggttcggatgcg 533
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatgtttaggatctgcagctttaaatatggccatggttgcaatgggtggttcggatgcg 480
Query: 534 tactttgagtttggcatacatgcttgggatatagcggctggagacattatcattagagag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tactttgagtttggcatacatgcttgggatatagcggctggagacattatcattagagag 540
Query: 594 gccggtggagtctgtattgatcctgccggagaacctctcgatctactgtccaggagagtt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gccggtggagtctgtattgatcctgccggagaacctctcgatctactgtccaggagagtt 600
Query: 654 ttgtgtgcctcaactcccgaacttgcccaagaattagccaaatctcttaaacagttttat 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgtgtgcctcaactcccgaacttgcccaagaattagccaaatctcttaaacagttttat 660
Query: 714 cccgagcgagattaaatcgtttttaaaatgcattttacttgttcctgtattatgtattct 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cccgagcgagattaaatcgtttttaaaatgcattttacttgttcctgtattatgtattct 720
Query: 774 gtgttgtatacttttaatgtgatgttaaataaaatgtgtaatctcattaatatatatgtt 833
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 721 gtgttgtatacttttaatgtgatgttaaatnnnatgtgtaatctcattaatatatatgtt 780
Query: 834 tt 835
||
Sbjct: 781 tt 782
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 172,344
Number of extensions: 3768
Number of successful extensions: 3768
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3768
Number of HSP's successfully gapped: 1
Length of query: 1228
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1211
Effective length of database: 8,119,229
Effective search space: 9832386319
Effective search space used: 9832386319
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)