BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00093 (UTR included)
(1903 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1H09 1312 0.0
>BF01037A1H09
Length = 745
Score = 1312 bits (662), Expect = 0.0
Identities = 683/690 (98%)
Strand = Plus / Plus
Query: 228 aaaaataatatacctaaggtatttctttaaaaagtgaaaatgaataaaatatgtagaatt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56 aaaaataatatacctaaggtatttctttaaaaagtgaaaatgaataaaatatgcagaatt 115
Query: 288 tgtttggaagaaggtgtattatcatctatttttgttgaaaactatagtatctctatatgt 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tgtttggaagaaggtgtattatcatctatttttgttgaaaactatagtatctctatatgt 175
Query: 348 gagatgattgaatactgtagcaatattaaggtaagaaataaaacctaaacgtaacgtttg 407
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 176 gagatgattgaatactgtagcaatattaaggtaagaaaaaaaacctaaacgtaacgtttg 235
Query: 408 tatatacattcggtctatcaattttttaaattattcggttattttaagataagtcgtaat 467
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 236 tatatacattcggtctatcaattttttaaattattgggttattttaagataagtcgtaat 295
Query: 468 gacgggctgcctgaacaaatgtgtagtaactgtatgtacaagttaggaatagcctatcat 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gacgggctgcctgaacaaatgtgtagtaactgtatgtacaagttaggaatagcctatcat 355
Query: 528 tttaaacaaacctgtgaacgcgccgatgttcgcttacgccaatatctaggaattcccaaa 587
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 356 tttaaacaaacctgtgaacgcgccgatgttcgcttacgccaatatctaggaattccaaaa 415
Query: 588 caaagcaaagttagtgatgctatggttatgacagatccaattgtaatgacacaaacaact 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caaagcaaagttagtgatgctatggttatgacagatccaattgtaatgacacaaacaact 475
Query: 648 ataatcaaaagatgtaaatgcaaacaagatcaaaagaaaaactcctcaaattataaaaga 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ataatcaaaagatgtaaatgcaaacaagatcaaaagaaaaactcctcaaattataaaaga 535
Query: 708 aaacctgagtccgagaaattaaaacgaggtccaaaaccgaagcctaagaaagtgcattcc 767
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 536 aaacctgagtccgagaaattaaaacgaggtccaaaaccgaagcctaagaaagtgcactcc 595
Query: 768 tgctatcaatgtaacaaagagttcaggtgccaagcacaattagacatgcatgtaaggaca 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tgctatcaatgtaacaaagagttcaggtgccaagcacaattagacatgcatgtaaggaca 655
Query: 828 catacaggagataagccatttgaatgcatgtactgtccgcagcggttcacacaaaaacac 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 catacaggagataagccatttgaatgcatgtactgtccgcagcggttcacacaaaaacac 715
Query: 888 aatctaacaatacaccttcgtgtccatact 917
|| || ||||||||||||||||||||||||
Sbjct: 716 aacctcacaatacaccttcgtgtccatact 745
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,165
Number of extensions: 7254
Number of successful extensions: 7254
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7254
Number of HSP's successfully gapped: 1
Length of query: 1903
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1886
Effective length of database: 8,119,229
Effective search space: 15312865894
Effective search space used: 15312865894
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)