BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00096 (UTR included)
(1858 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057A2B01 1457 0.0
>BF01057A2B01
Length = 822
Score = 1457 bits (735), Expect = 0.0
Identities = 777/791 (98%)
Strand = Plus / Plus
Query: 432 ctttttaggttatattggtagagagaatataagaattattgcaaaacataaggaaaattg 491
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 32 ctttttaggttatattggtagagagaatataagaattattgcaaaagataaggaaaattc 91
Query: 492 gtatttaagatgagttcagcgttaataaacgctattaaaaggcttaacatatctgtcctt 551
|||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 92 gtatttaagatgagttcagcgttaataaacgctattaaaaagctaaacatctctgtcctt 151
Query: 552 cctcaaatacgtttctgctcattaacagctaactcaagttccgctataaacgttattaat 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cctcaaatacgtttctgctcattaacagctaactcaagttccgctataaacgttattaat 211
Query: 612 aacgaagtttctgtcaccaagaaagaatggaagtttccaccatcgtatacaaaaccacgt 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aacgaagtttctgtcaccaagaaagaatggaagtttccaccatcgtatacaaaaccacgt 271
Query: 672 gaagtttggattgaaaatttggatacaattgaagaaaaaaaagtaggattatttgagctt 731
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 272 gaagtttggattgaaaatttggatacaattgaagaaaaaaaagtaggtttatttgagctt 331
Query: 732 catcctttagtatacgctgcagctccccgtatagatataatccataaaaatgttgtttgg 791
|||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 332 catcctttagtatatgctgcagctccccgtatagatagaatccataaaaatgttatttgg 391
Query: 792 caaagaaagtatcgctgggtatcatgggcccacactaaaacgcgggctgaagttaggggt 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 caaagaaagtatcgctgggtatcatgggcccacactaaaacgcgggctgaagttaggggt 451
Query: 852 ggaggtaaaaaaccatggccccaaaagggtctgggtcgagcccggcatgggtctattagg 911
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 452 ggaggtaaaaaaccatggccccaaaagggtctggttcgagcccggcatgggtctattagg 511
Query: 912 tcaccactatggcgtggaggtggtatcgcacatggaccacgttctggaaaaactcacttt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcaccactatggcgtggaggtggtatcgcacatggaccacgttctggaaaaactcacttt 571
Query: 972 tatatgttagatatatactcaagactccatggcctgacttcaacattatcagcaaagttt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tatatgttagatatatactcaagactccatggcctgacttcaacattatcagcaaagttt 631
Query: 1032 gcacaagatgatctccatgttgtgagagatttggaactacctactgatgaatcggaatac 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcacaagatgatctccatgttgtgagagatttggaactacctactgatgaatcggaatac 691
Query: 1092 ctcattgaactcattgagaaaagaaattggggtccttcagtattgcttgttgatgacact 1151
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 692 ctcattgaactcattgagaaaagaaattggggtccttctgtattgcttgttgatgacact 751
Query: 1152 gactatgctcctcggaacataacggttgcaacggacagtttacaatatgtaaacatcatg 1211
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 752 gactatgctcctcggaacataacagttgcaacagacagtttacaatatgtaaacatcatg 811
Query: 1212 cctgtatatgg 1222
|| ||||||||
Sbjct: 812 cccgtatatgg 822
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,573
Number of extensions: 5205
Number of successful extensions: 5205
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5205
Number of HSP's successfully gapped: 1
Length of query: 1858
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1841
Effective length of database: 8,119,229
Effective search space: 14947500589
Effective search space used: 14947500589
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)