BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00120 (UTR included)
(1477 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_486_C1 583 e-166
>BF14_486_C1
Length = 3127
Score = 583 bits (294), Expect = e-166
Identities = 336/350 (96%)
Strand = Plus / Minus
Query: 87 tatatatcggattttattacaaattaattattttaaagacaggacgccagcctcgctgac 146
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct: 3013 tatatatcggattttattataaattcattattttaaagacaggacgccagcctcgctggc 2954
Query: 147 gtcactaatgtcacttgtttcagtacgttccagatattttaaaatgaaacttcaattctt 206
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2953 gtctctaatgtcacttgtttcagtacgttccagatattttaaaatgaaacttcaattctt 2894
Query: 207 ctaaatgttcttgtatttctcgaaggttctttatgctccgcactcgctgaactctgcagt 266
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2893 ctagatgttcttgtatttctcgaaggttctttatgctccgcactcgctgaactctgccgt 2834
Query: 267 cccctgccgtgcgtccagacgtcatatttataccagaattcaaacatagttctattctct 326
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2833 cccctgtcgtgcgtccagacgtcatatttaaaccagaattcaaacatagttctattctct 2774
Query: 327 ttgatttcgttttacttttaacaatagtaacgacgaccaataagttgttataataattga 386
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2773 ttgatttcgttttacttttaacaatagtaacgacgaccaataaggtgttataataattgg 2714
Query: 387 tgccagttatttccatgttgcattcgtcattgaagctgcttgcggcgata 436
|||||||||||| |||||||||| |||| ||||||||||||||| |||||
Sbjct: 2713 tgccagttattttcatgttgcatccgtcgttgaagctgcttgcgccgata 2664
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 90 atatcggattttattacaaattaattattttaaagacaggacgccagcctcgc 142
||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 53 atatcggatttaattacaaattcattgttttaaaaacaggacgccagcctcgc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,273
Number of extensions: 4048
Number of successful extensions: 4048
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4048
Number of HSP's successfully gapped: 2
Length of query: 1477
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1460
Effective length of database: 8,119,229
Effective search space: 11854074340
Effective search space used: 11854074340
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)