BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00129 (UTR included)
(4145 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1B07 987 0.0
>BF01022B1B07
Length = 706
Score = 987 bits (498), Expect = 0.0
Identities = 557/578 (96%), Gaps = 7/578 (1%)
Strand = Plus / Plus
Query: 2323 aggtcattctgcgacagggttacggcaagccagtggattggtggtcgatgggcatcatac 2382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aggtcattctgcgacagggttacggcaagccagtggattggtggtcgatgggcatcatac 70
Query: 2383 tgtacgagttcatagtgggatgtgtgccgttcttcggcgacactcctgaagaactgttcg 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgtacgagttcatagtgggatgtgtgccgttcttcggcgacactcctgaagaactgttcg 130
Query: 2443 ctcatacagttaacgacgatatagagtggccctcggaagacgatttccctatagcagtgg 2502
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 131 ctcatacagttaacgacgatatnnngtggccctcggaagacgatttccctatagcagtgg 190
Query: 2503 aggcgcgcgccatcatcaccgagctgctggcgaggaacccccgcgacaggctcggcacgg 2562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aggcgcgcgccatcatcaccgagctgctggcgaggaacccccgcgacaggctcggcacgg 250
Query: 2563 cggggacgcatcaagtgaaggagcacatttacttctacggcctggactggaacaacctgc 2622
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 251 cggggacgcatcaagtgaaggagcacatttacttctacgggctggactggaacaacctgc 310
Query: 2623 tgcggcggaaggccgagttcataccgcagctggagaacgacgaggacaccagctacttcg 2682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgcggcggaaggccgagttcataccgcagctggagaacgacgaggacaccagctacttcg 370
Query: 2683 acagccggtgcgaccgatacaaccacagcgaggtggagacggacgaggcggcggaggccg 2742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acagccggtgcgaccgatacaaccacagcgaggtggagacggacgaggcggcggaggccg 430
Query: 2743 gcgaggcgaccgaggcgcacgag-gacgaggccggcctcttcgccgccttctcctccacc 2801
|||||||||||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 431 gcgaggcgaccgaggcgcacnagagacgaggccgnnntcttcgccgccttctcctccacc 490
Query: 2802 tcccctcagtggcgccggcactattcccactcccactcccactct------cactcccac 2855
||||||||| || | || |||||||||||||||||||||||||| |||||||||
Sbjct: 491 tcccctcagaggaggaggaactattcccactcccactcccactctcactcccactcccac 550
Query: 2856 tcccactcccactctcagtctcactcacagtccgcgat 2893
||||||||||||||||||||||||||||||| ||||||
Sbjct: 551 tcccactcccactctcagtctcactcacagtacgcgat 588
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,309
Number of extensions: 8071
Number of successful extensions: 8071
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8063
Number of HSP's successfully gapped: 2
Length of query: 4145
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4127
Effective length of database: 8,109,745
Effective search space: 33468917615
Effective search space used: 33468917615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)