BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00139 (UTR included)
(1758 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2E01 1294 0.0
BF01012A1C12 664 0.0
BF01013A1D03 511 e-144
>BF01020A2E01
Length = 694
Score = 1294 bits (653), Expect = 0.0
Identities = 677/685 (98%)
Strand = Plus / Plus
Query: 223 gcgtcgcgtcgccaaacatccaatattcggtgaaactttggccgcgacggttggcactga 282
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10 gcgtcgcgtcgccaaacatccaatattcggtgaaactttggccgcgacggtcggcactga 69
Query: 283 tggttcgcactacaagaacgcgtgtttccgccacgccgccgcccacgtcctctccccgcc 342
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tggctcgcactacaagaacgcgtgtttccgccacgccgccgcccacgtcctctccccgcc 129
Query: 343 actccgcgaccccagcacaccggaagccatcatcgacgccctcgcacacgacgacctcca 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 actccgcgaccccagcacaccggaagccatcatcgacgccctcgcacacgacgacctcca 189
Query: 403 agtgatagccagcgacaactgcaccttcaatgaaaaagataaggaattggggaaaaacga 462
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 190 agtgatagccagcgacaactgcaccttcaatgagaaagataaggaattggggaaaaacga 249
Query: 463 cttcaccaagatacctaacggcgtgaacggggtcgaggaccgcatggctatactgtggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cttcaccaagatacctaacggcgtgaacggggtcgaggaccgcatggctatactgtggca 309
Query: 523 gaaagcggtcaacactggtgtcatggacccttgtcgtttcgtggccgtgacgagtaccaa 582
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 310 gaaagcggtcaacactggtgtcatggacccttgtcgtttcgtggccgtgactagtaccaa 369
Query: 583 cgctgcgaatatcttcaacctaccgtccaagggccgcgtggcggtgggcgcggacggtga 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cgctgcgaatatcttcaacctaccgtccaagggccgcgtggcggtgggcgcggacggtga 429
Query: 643 cgtcatcgtttgggaccctcgcctcgagaagaccatttccgccgcgacccaccaccacgc 702
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cgtcatcgtttgggatcctcgcctcgagaagaccatttccgccgcgacccaccaccacgc 489
Query: 703 cgtagattttaatatatttgagggtcagcgcgtggtcggtggacctcaatacgttattgt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgtagattttaatatatttgagggtcagcgcgtggtcggtggacctcaatacgttattgt 549
Query: 763 gaacggtcgagtgtgtctcgatgacggtgaccttagggtcgctgaaggttacggtaaatt 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaacggtcgagtgtgtctcgatgacggtgaccttagggtcgctgaaggttacggtaaatt 609
Query: 823 cttacccacaccaccaaattctccgtacgtgtacggtgaagtacccaccacgccgcaacc 882
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cttatccacaccaccaaattctccgtacgtgtacggtgaagtacccaccacgccgcaacc 669
Query: 883 ggaaagggttgaatacttgccctca 907
|||||| || |||||||||||||||
Sbjct: 670 ggaaagagtcgaatacttgccctca 694
>BF01012A1C12
Length = 732
Score = 664 bits (335), Expect = 0.0
Identities = 385/402 (95%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 1357 aaatattattggtcagttatcagaattaataacataaaaggtatatgtcaatattattaa 1416
|||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 1 aaatattattggtcagttatcaaaattaatancttaaaaggtatatgtcaatattattaa 60
Query: 1417 cgttagaaccgggttgaaccggatagaactggttttaaggacgatcgcttttcgcttgga 1476
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 cgttagaaccgggttgaaccggatagaactggttttaaggacgannncttttcgcttgga 120
Query: 1477 catgactaaattaatgcaaaactgacataaaaaaatttattggaaaataaagtttttttt 1536
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 catgactaaattaatgcaaaactgacataaaaaaatttattggaaaataaag-ttttttt 179
Query: 1537 tttgtaataatcggagtaaatataatgacttgttaatcatgattgattgattatagtaag 1596
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 180 ttaataataatcggagtaaatataatgacttgttaatcatgattgattgattatagaaag 239
Query: 1597 gatgtttttttcaacatgaaagtcgcatttgtattcgagcttgttgcctttgatgtatga 1656
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gatg-ttttttcaacatgaaagtcgcatttgtattcgagcttgttgcctttgatgtatga 298
Query: 1657 cgtgcaaaattgacaggcatttaatgtgtatggaggaaatctgagaatatttaactgagc 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cgtgcaaaattgacaggcatttaatgtgtatggaggaaatctgagaatatttaactgagc 358
Query: 1717 gttagtttgaatacattaagacgtttgtttttagtgagcgat 1758
||||||||| ||||||||||||| ||||||||||||||
Sbjct: 359 gttagtttggatacattaagacgnnnnnttttagtgagcgat 400
>BF01013A1D03
Length = 329
Score = 511 bits (258), Expect = e-144
Identities = 310/327 (94%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 1417 cgttagaaccgggttgaaccggatagaactggttttaaggacgatcgcttttcgcttgga 1476
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1 cgttagaaccgggttgaaccggatagaactgggtttaaggatgatcgcttttcgcttgga 60
Query: 1477 catgactaaattaatgcaaaactgacataaaaaaatttattggaaaataaagtttttttt 1536
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 catgactaagttaatgcaaaactgacataaaaaaatttattggaaaataaagtttt-ttt 119
Query: 1537 tttgtaataatcggagtaaatataatgacttgttaatcatgattgattgattatagtaag 1596
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tttgtaataatcagagtaaatataatgacttgttaatcatgattgattgattatagtaag 179
Query: 1597 gatgtttttttcaacatgaaagtcgcatttgtattcgagcttgttgcctttgatgtatga 1656
|||||||||||| | |||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 180 gatgtttttttcnangtgaaagtcgcatttgtatncaagcttgttgcctttgatgtatga 239
Query: 1657 cgtgcaaaattgacaggcatttaatgtgtatggaggaaatctgagaatatttaactgagc 1716
||||||||||||||||||||||||| ||||||||| ||||| || ||||||||| |||||
Sbjct: 240 cgtgcaaaattgacaggcatttaatatgtatggagaaaatccgaaaatatttaagtgagc 299
Query: 1717 gttagtttgaatacattaagacgtttg 1743
|| |||||| |||||||||||||||||
Sbjct: 300 gtgagtttggatacattaagacgtttg 326
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,943
Number of extensions: 3936
Number of successful extensions: 3936
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3932
Number of HSP's successfully gapped: 3
Length of query: 1758
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1741
Effective length of database: 8,119,229
Effective search space: 14135577689
Effective search space used: 14135577689
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)