BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00143 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B1G09 1300 0.0
>BF01027B1G09
Length = 777
Score = 1300 bits (656), Expect = 0.0
Identities = 752/789 (95%), Gaps = 20/789 (2%)
Strand = Plus / Plus
Query: 373 tgcttagtcattaattgttatttagttgtattaacttttattgttttgaaggccatattt 432
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 9 tgcttagtcattaattgttatttagttgtattcacttttattgttttgaaggccatattt 68
Query: 433 aaaacaaccaaccaaccatcttttattgtaaatatttttttatatttttttatatataat 492
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 aaaacaaccaaccaaccatcttttattgtaaatatttttttatat--------------- 113
Query: 493 gatatataatggaattcccatcactgggtgaccaatgccaaaaccaaagctgcaatcaaa 552
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 114 -----ataatggaattcccatcactgggtgaacaatgccaaaaccaaaactgcaatcaaa 168
Query: 553 tagatttcttacctttacaatgtaaatgtggcaaaacatattgtcgggaacatttcaatg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tagatttcttacctttacaatgtaaatgtggcaaaacatattgtcgggaacatttcaatg 228
Query: 613 aacattgcctatctggtgattgtcaactagctcctgaaccgcgcgaagttaaatttcaaa 672
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 229 aacattgcctatctggtgattgtccactagctcctgaaccgcgcgaagttaaatttcaaa 288
Query: 673 gtgacgataagatatacaaatgttcggaaagcggctgtaagaagggaaatctgcatgaaa 732
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 289 gtgacgataagatatacaaatgttctgaaagcggttgtaagaagggaaatctgcatgaaa 348
Query: 733 tgctttgtaataaatgttcgaaacacttttgtattgaacataggtttcatccatcatgtc 792
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 349 tgctttgtattaaatgttcgaaacacttttgtattgaacataggtttcatccgtcatgtc 408
Query: 793 cagagatagacgatgaaacaatggcaataaagatagagcaattggaagcacccagaaggc 852
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cagagatagatgatgaaacaatggcaataaagatagagcaattggaagcacccagaaggc 468
Query: 853 agttcagagaggccaataaacatttagaagaaaagataacggaaaacataagaaaagctt 912
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 469 agttcagagaggccaataaacatttagaagataagataacggaaaacataagaaaagctt 528
Query: 913 tgcaatcgtctgcgaaggtgaaaactgcatctaaaatacatttaatgagaataaaacaga 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgcaatcgtctgcgaaggtgaaaactgcatctaaaatacatttaatgagaataaaacaga 588
Query: 973 aagccctcggcccaaagtcggttccagtcggcaacagagtttattttgctgtaaaaaagc 1032
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aagccctcggcccaaagtcagttccagtcggcaacagagtttattttgctgtaaaaaagc 648
Query: 1033 cattgaatcccgatccaaaaccagtgactgttgtaaaaaatgtggatgacattaataagt 1092
|||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| |
Sbjct: 649 cattgaatcccgatccaaaacctgtgactattgtaaaaaatgtggatgacataaataact 708
Query: 1093 taaaaaatatggagtcagcattaaatccggacctgaaagacacagttcctgtttttattt 1152
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgaaaaatgtggagtcagcattaaatccggacctgaaagacacagttcctgtttttattt 768
Query: 1153 cttcaaaat 1161
|||||||||
Sbjct: 769 cttcaaaat 777
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,565
Number of extensions: 10740
Number of successful extensions: 10740
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10740
Number of HSP's successfully gapped: 2
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)