BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00148 (UTR included)
(1375 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1E04 76 2e-13
BF01011A1H06 76 2e-13
BF01052B1F12 72 3e-12
BF01012A1B09 68 4e-11
BF14_729_C2 68 4e-11
>BF01012A1E04
Length = 841
Score = 75.8 bits (38), Expect = 2e-13
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 85 tgagatctaagactttcgcgcattttatacacttaaactgaaactaatat-ttttcggat 143
|||||||||||||||||||| |||||| || ||||| |||||||||||| |||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaa-tgaaactaatatattttcggat 560
Query: 144 atactacgcg 153
||||||||||
Sbjct: 559 atactacgcg 550
>BF01011A1H06
Length = 739
Score = 75.8 bits (38), Expect = 2e-13
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 82 taatgagatctaagactttcgcgcattttatacacttaaactgaaactaatatttttcgg 141
||||||||||||||| ||||||| |||||| || ||||| |||| ||| ||||||||||
Sbjct: 608 taatgagatctaagattttcgcgacttttattcatttaaa-tgaatctagtatttttcgg 550
Query: 142 atatactacgcgtgctttattt 163
||| |||||||||| |||||||
Sbjct: 549 ataaactacgcgtgatttattt 528
>BF01052B1F12
Length = 785
Score = 71.9 bits (36), Expect = 3e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 84 atgagatctaagactttcgcgcattttatacacttaaactgaaactaatatttttcggat 143
|||| |||||||| ||||||| |||||| || ||||| |||||||||||||||||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaa-tgaaactaatatttttcggat 355
Query: 144 atactacgcgtgctttattt 163
||||| ||||| |||||||
Sbjct: 356 atacttcgcgtcttttattt 375
>BF01012A1B09
Length = 841
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 84 atgagatctaagactttcgcgcattttatacacttaaactgaaactaatatttttcggat 143
||||||||||||||| ||||| |||||| || ||||| |||||||||||| ||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaa-tgaaactaatatatttcggat 763
Query: 144 atactacgcg 153
| ||||||||
Sbjct: 764 acactacgcg 773
>BF14_729_C2
Length = 1289
Score = 67.9 bits (34), Expect = 4e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 82 taatgagatctaagactttcgcgcattttatacacttaaactgaaactaatatttttcgg 141
|||||||||||||||||||||| ||||| || ||||| |||||||| ||| |||||
Sbjct: 676 taatgagatctaagactttcgccagttttaatcatttaaa-tgaaactagaattattcgg 618
Query: 142 atatactacgcgtgctttattt 163
||| ||||||||||||||||||
Sbjct: 617 ataaactacgcgtgctttattt 596
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,264
Number of extensions: 7499
Number of successful extensions: 7499
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 7494
Number of HSP's successfully gapped: 5
Length of query: 1375
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1358
Effective length of database: 8,119,229
Effective search space: 11025912982
Effective search space used: 11025912982
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)