BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00171 (UTR included)
(1378 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2F08 1118 0.0
>BF01025B2F08
Length = 872
Score = 1118 bits (564), Expect = 0.0
Identities = 588/596 (98%)
Strand = Plus / Plus
Query: 442 ggtatcccatatatcaaaagggaaatcctcaacttcgagtctttttaccgaacttttgga 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggtatcccatatatcaaaagggaaatcctcaacttcgagtctttttaccgaacttttgga 95
Query: 502 tgaagttggtccgcccttatgataaacaacagccaaacatagttcattttcattgttcaa 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tgaagttggtccgcccttatgataaacaacagccaaacatagttcattttcattgttcaa 155
Query: 562 tggaaatgacaaaatatgacataaaaaactatcttgaaaaaatctacaatgtgccagtgg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tggaaatgacaaaatatgacataaaaaactatcttgaaaaaatctacaatgtgccagtgg 215
Query: 622 ttcatgtaagaacaaagatagctttggggaaatttaaaaaagaaatagttaaagggtaca 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttcatgtaagaacaaagatagctttggggaaatttaaaaaagaaatagttaaagggtaca 275
Query: 682 ttaccaaagatgaagatgttaaagttgcctatgttacattgccaaaaacacataagtttg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttaccaaagatgaagatgttaaagttgcctatgttacattgccaaaaacacataagtttg 335
Query: 742 aatttccggacatatttgaaaagaagacgggcagcgaagacgatgcgaaagcattagaag 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aatttccggacatatttgaaaagaagacgggcagcgaagacgatgcgaaagcattagaag 395
Query: 802 aaacaaagaaatcattcaaaaaattccttgaaaagaacaaagacagaaccgatgttccaa 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaacaaagaaatcattcaaaaaattccttgaaaagaacaaagacagaaccgatgttccaa 455
Query: 862 gctggttttcaatttgaatcatcgtagttgtacagagaaatagtttaattagtcattaaa 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gctggttttcaatttgaatcatcgtagttgtacagagaaatagtttaattagtcattaaa 515
Query: 922 taaagaatacacatcggattacttgtttggtctcatttttgttttcatataattaataca 981
|||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||
Sbjct: 516 taaagaatacacatcggatttcttgtttggtctcattttttttctcatataattaaatca 575
Query: 982 tcttttctgtgcgcacatataaacattgcatgtaaagactttaatgctaggttaat 1037
|||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 576 tcttttctgtacgcacatatgaacattgcatggaaagactttaatgctaggttaat 631
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 340 acaattatttatatataataaaatgtcaacacgatggta 378
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaattatttatatataataaaatgtcaacacgatggta 39
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,769
Number of extensions: 6286
Number of successful extensions: 6286
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6286
Number of HSP's successfully gapped: 2
Length of query: 1378
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1361
Effective length of database: 8,119,229
Effective search space: 11050270669
Effective search space used: 11050270669
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)