BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00202 (UTR included)
(1317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2100_C2 997 0.0
>BF14_2100_C2
Length = 2423
Score = 997 bits (503), Expect = 0.0
Identities = 512/515 (99%)
Strand = Plus / Plus
Query: 57 agaagtcccctcacaatggcaacagaactctcctccatagtttctcgacgaatgacgcag 116
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 agaagtcacctcacaatgggaacagaactctcctccatagtttctcgacgaatgacgcag 889
Query: 117 ctttaggagaatacaagtataccgtcacgtttggtcaacattccatcaaaatcaccggga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 ctttaggagaatacaagtataccgtcacgtttggtcaacattccatcaaaatcaccggga 949
Query: 177 acaatctggatctggtcaagacggcaaagctggtgttggacgagtatttcgagagtgcgg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 acaatctggatctggtcaagacggcaaagctggtgttggacgagtatttcgagagtgcgg 1009
Query: 237 gggcgttggaggcaatggggttggggtcgggggacttcttcaccttgtcccagagaccgg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 gggcgttggaggcaatggggttggggtcgggggacttcttcaccttgtcccagagaccgg 1069
Query: 297 cggccgcgctgctgctgcgagatgacgccgcgctcaacggagctgacgatgacgtgttcg 356
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 ccgccgcgctgctgctgcgagatgacgccgcgctcaacggagctgacgatgacgtgttcg 1129
Query: 357 ccacggacgcgcggcccgaagaagccactgtggacgagagcgagaccgtgccacgccgcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 ccacggacgcgcggcccgaagaagccactgtggacgagagcgagaccgtgccacgccgcc 1189
Query: 417 cacgtttctcgcgcgccacctccaccgataagggcgcaggagggggcgctcggcagacgt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 cacgtttctcgcgcgccacctccaccgataagggcgcaggagggggcgctcggcagacgt 1249
Query: 477 attcgtacgagacgctggtgcagtacgcggactcgccgctgagcaagctgccgccggccg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 attcgtacgagacgctggtgcagtacgcggactcgccgctgagcaagctgccgccggccg 1309
Query: 537 ggctggccgccttcccgcccgagctggcgcgcaag 571
|||||||||||||||||||||||||||||||||||
Sbjct: 1310 ggctggccgccttcccgcccgagctggcgcgcaag 1344
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 104,918
Number of extensions: 1778
Number of successful extensions: 1778
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1778
Number of HSP's successfully gapped: 1
Length of query: 1317
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1300
Effective length of database: 8,119,229
Effective search space: 10554997700
Effective search space used: 10554997700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)