BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00207 (UTR included)
(1710 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2F02 418 e-116
BF01007X1E10 414 e-115
>BF01014B2F02
Length = 623
Score = 418 bits (211), Expect = e-116
Identities = 230/238 (96%)
Strand = Plus / Plus
Query: 784 aggtcagcgtttgattcgtaaatgtgattatcatctgggacaaagagtacacgccatgtt 843
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 192 aggtcagcgtttgattcgtaaatgtgattannnnntgggacaaagagtacacgccatgtt 251
Query: 844 tcgtttggcggctagaggggagagacagacacacgtcactatgttcacaaccctcgacgg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcgtttggcggctagaggggagagacagacacacgtcactatgttcacaaccctcgacgg 311
Query: 904 gggagtaggctacgtgctgcctgtctcagagaaggtctaccgaagattattgatgttgca 963
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggagtaggttacgtgctgcctgtctcagagaaggtctaccgaagattattgatgttgca 371
Query: 964 gaacgtcatcaacaactactgctgccatctagcgggactcaaccctaaagcttacagg 1021
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaacgtcattaacaactactgctgccatctagcgggactcaaccctaaagcttacagg 429
>BF01007X1E10
Length = 741
Score = 414 bits (209), Expect = e-115
Identities = 218/222 (98%)
Strand = Plus / Plus
Query: 250 gtctggtctccgcggttacatcgcgataggaactaattataactacggagaggatattac 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gtctggtctccgcggttacatcgcgataggaactaattataactacggagaggatattac 579
Query: 310 ttctagagggaggattttgatttacgatataatagatgtcgtaccagaaccgggccagcc 369
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 580 ttctagagggaggattttgatttacgatataatagatgtcgtacccgaaccgggccagcc 639
Query: 370 gttgaccaaaaataggtttaaagaaatatacgcgaaggaacagaagggtcccgtgacagc 429
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 640 gttgaccaaaaataggtttaaagaaatatacgcgaaggaacagannngtcccgtgacagc 699
Query: 430 tctcacacaagttttagggttcctcatatcggctgtgggtca 471
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tctcacacaagttttagggttcctcatatcggctgtgggtca 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,772
Number of extensions: 4259
Number of successful extensions: 4259
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4259
Number of HSP's successfully gapped: 2
Length of query: 1710
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1693
Effective length of database: 8,119,229
Effective search space: 13745854697
Effective search space used: 13745854697
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)