BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00210 (UTR included)
(1879 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2H03 428 e-119
>BF01037B2H03
Length = 830
Score = 428 bits (216), Expect = e-119
Identities = 267/284 (94%)
Strand = Plus / Minus
Query: 786 tggtccatggtgctttttactgatgagtctcggtttggatttcatgcggatttacgaaga 845
|||||||||||| ||||| | |||||||||||||||||||||||| | |||| |||||||
Sbjct: 284 tggtccatggtgtttttttcagatgagtctcggtttggatttcatccagattcacgaaga 225
Query: 846 gaaaggatttggcgagttcctggtagacgaagccgtctccagcatccacaagaagtccat 905
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 224 ctaagggtttggcgagttcctggtagacgaagccgtctccagcatccacaagaagcccat 165
Query: 906 tcatatcaaggcggcactattatgatatgggctggtattcgtatcggtgcgcgaaccgat 965
|||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 164 tcatatcaaggcagcattattatggtatgggctggtattcgtatcggtgcgcgaaccgat 105
Query: 966 ctcatttggataagagggaacatgaatgcactaaaataccgcaatgaggtagtggaacct 1025
|| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 104 ctgatttggataagagggaacataaatgcactgaaataccgcaatgaggtagtggaacct 45
Query: 1026 atgattatcccacacagggtacaaatgggtcaggagttccaact 1069
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 gtgattatcccacacagggtacaaatgggtcaggagttccaact 1
Score = 208 bits (105), Expect = 2e-53
Identities = 215/249 (86%), Gaps = 7/249 (2%)
Strand = Plus / Minus
Query: 60 taaatatacacatcaacaatgtctagggatattacatgaaagacttctgaacttaaaaac 119
||||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||
Sbjct: 536 taaatgtacacatcaacaatgtctagggatattacgtgaaagatttcttaacttaaaaac 477
Query: 120 tatttactgtata-aaaaaagttagtgtataaaatatttttttccac-cacttctttcca 177
| |||| | |||| ||||||||| | ||||||||||||| ||| | ||||||||||||
Sbjct: 476 tttttaatatatacaaaaaagtttatatataaaatattttattctccacacttctttcca 417
Query: 178 aatacaaaaaaa-----aaactcattttggaacaaaataatgtgtattattcaaatttgg 232
||| |||||||| ||| ||||||| ||||||| ||||| | | || |||||||
Sbjct: 416 aattcaaaaaaataaaaaaaatcattttaaaacaaaagaatgtcggtaactcgaatttgg 357
Query: 233 ctgtcgaaaagttagttcatgttacaataaaacagtgaagttctgaaaaattaaaagtga 292
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 356 ccgtcgaaaagttagttcatgttaaaataaaacagtgaagttctgaaaaattaaaagtga 297
Query: 293 ttacacatt 301
| |||||||
Sbjct: 296 taacacatt 288
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,324
Number of extensions: 5937
Number of successful extensions: 5937
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5934
Number of HSP's successfully gapped: 2
Length of query: 1879
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1862
Effective length of database: 8,119,229
Effective search space: 15118004398
Effective search space used: 15118004398
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)