BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00216 (UTR included)
(1975 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 129 2e-29
BF14_335_C4 113 1e-24
BF14_335_C2 100 2e-20
BF01049B1F01 92 4e-18
BF01056B2D01 84 1e-15
BF01016A2B02 82 4e-15
BF01014B2F02 80 2e-14
BF01044B1A07 78 6e-14
BF01045B1A06 68 6e-11
>BF01019A1H08
Length = 504
Score = 129 bits (65), Expect = 2e-29
Identities = 86/93 (92%)
Strand = Plus / Plus
Query: 588 gcattccatggactcgccgtgcggatgccgggtccatcgcgttgcagggagaggagcttc 647
|||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 gcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttc 439
Query: 648 cacagtgcctgggactttcgacccaggtgtagg 680
||||||||||||| || |||||||||||||||
Sbjct: 440 aacagtgcctgggagttgcgacccaggtgtagg 472
>BF14_335_C4
Length = 1491
Score = 113 bits (57), Expect = 1e-24
Identities = 85/93 (91%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 588 gcattccatggactcgccgtgcggatgccgggtccatcgcgttgcagggagaggagcttc 647
|||||||||||| || |||||||| ||| ||| ||||||||||||||| |||||||||||
Sbjct: 1348 gcattccatggattcaccgtgcggttgcggggaccatcgcgttgcagg-agaggagcttc 1290
Query: 648 cacagtgcctgggactttcgacccaggtgtagg 680
|||||||||||||||| |||||||||||||||
Sbjct: 1289 aacagtgcctgggacttgcgacccaggtgtagg 1257
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 2e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 595 atggactcgccgtgcggatgccgggtccatcgcgttgcagggagaggagcttccacagtg 654
||||| || |||||||| |||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 831 atggattcaccgtgcgggtgccgggtccgccgcgttgcagggagaggagcttcaacagtg 890
Query: 655 cctgggactttcgacccaggtgtagg 680
||||||| || |||| ||||||||||
Sbjct: 891 cctgggatttgcgacacaggtgtagg 916
>BF01049B1F01
Length = 840
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 627 cgttgcagggagaggagcttccacagtgcctgggactttcgacccaggtgtagg 680
||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtagg 640
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 589 cattccatggactcgccgtgcggatgccgggtccatcgcgttgcagggagaggagcttcc 648
||||||||| | || |||||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 93 cattccatgaattcaccgtgcgggtgccgggtccatcacattgcagggagaggagcttca 152
Query: 649 acagtgcctgggac 662
|||| |||||||||
Sbjct: 153 acagcgcctgggac 166
>BF01016A2B02
Length = 780
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 613 tgccgggtccatcgcgttgcagggagaggagcttccacagtgcctgggactttcgaccca 672
|||||||||| ||||||| ||||||||||||||| ||||||||||||| || |||| ||
Sbjct: 210 tgccgggtcccgcgcgttgaagggagaggagcttcaacagtgcctgggaattgcgactca 269
Query: 673 ggtgtaggc 681
|||||||||
Sbjct: 270 ggtgtaggc 278
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 604 ccgtgcggatgccgggtccatcgcgttgcagggagaggagcttccacagtgcctgggact 663
|||||||| ||||||||||| |||||||||||||||||||||| ||| |||| |||||
Sbjct: 551 ccgtgcgggtgccgggtcca--gcgttgcagggagaggagcttcagcagcgcctaggact 608
Query: 664 ttcgacccaggtgta 678
| |||||||||||||
Sbjct: 609 tgcgacccaggtgta 623
>BF01044B1A07
Length = 806
Score = 77.8 bits (39), Expect = 6e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 595 atggactcgccgtgcggatgccgggtccatcgcgttgcagggagaggagcttccacagtg 654
||||| || |||||||| || |||||||||||||| ||||||||||||||||| || |||
Sbjct: 450 atggattcaccgtgcgggtggcgggtccatcgcgtggcagggagaggagcttcaactgtg 509
Query: 655 cctgggactttcgacccaggtgt 677
|||||||| ||| ||||||||
Sbjct: 510 tctgggactcgcgaaccaggtgt 532
>BF01045B1A06
Length = 820
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 607 tgcggatgccgggtccatcgcgttgcagggagaggagcttccacagtgcctgggactt 664
||||| ||| |||||||| | |||||||||||||||||||| ||||||||| ||||||
Sbjct: 690 tgcgggtgcggggtccattgtgttgcagggagaggagcttcaacagtgccttggactt 747
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,004
Number of extensions: 5752
Number of successful extensions: 5752
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 5750
Number of HSP's successfully gapped: 9
Length of query: 1975
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1958
Effective length of database: 8,119,229
Effective search space: 15897450382
Effective search space used: 15897450382
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)