BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00228 (UTR included)
(2896 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A2B11 1574 0.0
BF01022B2F09 1277 0.0
>BF01039A2B11
Length = 831
Score = 1574 bits (794), Expect = 0.0
Identities = 813/821 (99%)
Strand = Plus / Plus
Query: 1084 atgccaaaaagaaaaagatggtggtggcgcgagatgaaagaaagaagaagaaggtggaag 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atgccaaaaagaaaaagatggtggtggcgcgagatgaaagaaagaagaagaaggtggaag 70
Query: 1144 ccaagagaagcgaacagaaggatttagtcgtgaaagctgtaatccagcgcggcattaaaa 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ccaagagaagcgaacagaaggatttagtcgtgaaagctgtaatccagcgcggcattaaaa 130
Query: 1204 tatccaaatgcgaagatgaagatgacatagatctatcaaagttagaaccaactttgccgg 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tatccaaatgcgaagatgaagatgacatagatctatcaaagttagaaccaactttgccgg 190
Query: 1264 gggctcaggagtctatagtacatttagagaatggcattttaaaatggccggtgctattcc 1323
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gggctcaggagtctgtagtacatttagagaatggcattttaaaatggccggtgctattcc 250
Query: 1324 tgtatccggaatatcagacgtccgatttcgtgaaagcctgcccagaggatgtgccactga 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgtatccggaatatcagacgtccgatttcgtgaaagcctgcccagaggatgtgccactga 310
Query: 1384 ttcgccaattggagcaactatttccagcgccttgggacgaggctaaaacttacaacgtta 1443
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 311 ttcgccaattggagcaactatttccagcgccttgggacgaggctaaaacttacaacctta 370
Query: 1444 gaagcattaacgtctattacgagggtagcgacaaaatgcctcacgtggttgatccgaaaa 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaagcattaacgtctattacgagggtagcgacaaaatgcctcacgtggttgatccgaaaa 430
Query: 1504 agaatttaggtgaactgttagttgctaaatattatgaattgaaggccggcactcccgcgt 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agaatttaggtgaactgttagttgctaaatattatgaattgaaggccggcactcccgcgt 490
Query: 1564 ttttcgttatggtacgcggcagtcgggcggaaagcagatttatagaatgttatctgtacc 1623
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttttcattatggtacgcggcagtcgggcggaaagcagatttatagaatgttatctgtacc 550
Query: 1624 aagaagatgtccaggtaacaagtagaaaagcagaaaagtatgcttgcttgtacagcaata 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagaagatgtccaggtaacaagtagaaaagcagaaaagtatgcttgcttgtacagcaata 610
Query: 1684 gggctgcagagcattggaatctcagaaacttcaaacaagcactgtatgacagtgagaaag 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gggctgcagagcattggaatctcagaaacttcaaacaagcactgtatgacagtgagaaag 670
Query: 1744 ccttgctactaaaccccgaagacgacgaaacaagactaagagctgcaaaatcagcattgg 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ccttgctactaaaccccgaagacgacgaaacaagactaagagctgcaaaatcagcattgg 730
Query: 1804 aagcagctaaatatgacgcttctattgaacattgtcggaaactaatacagaaaaattgca 1863
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 731 aagcagctaaatatgacgcttctattgaacattgtcnnnnnctaatacagaaaaattgca 790
Query: 1864 cagatatagaactctttgagcttttggctattgctaaaatg 1904
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cagatatagaactctttgagcttttggctattgctaaaatg 831
Score = 178 bits (90), Expect = 3e-44
Identities = 210/250 (84%)
Strand = Plus / Plus
Query: 1945 tcgtgaaggctgtacttgagcgcggcattaaaatatctaaatgtaaaaataaaaatgaca 2004
||||||| |||||| | ||||||||||||||||||| ||||| || || || ||||||
Sbjct: 98 tcgtgaaagctgtaatccagcgcggcattaaaatatccaaatgcgaagatgaagatgaca 157
Query: 2005 tagatatatcaaaattagaaccaactttaccgggggctcgcgattctatggtatatttag 2064
||||| ||||||| |||||||||||||| |||||||||| || ||| | ||| ||||||
Sbjct: 158 tagatctatcaaagttagaaccaactttgccgggggctcaggagtctgtagtacatttag 217
Query: 2065 agaatggcgttttaaaatggccgattctatttctatatccggaatatgaaacctcagatt 2124
|||||||| |||||||||||||| | ||||| || |||||||||||| | || || ||||
Sbjct: 218 agaatggcattttaaaatggccggtgctattcctgtatccggaatatcagacgtccgatt 277
Query: 2125 tcttgacaggctgcccagagaatgtgccactgatttatcaattggaaaaactgttcccgg 2184
|| ||| || |||||||||| |||||||||||||| |||||||| |||| || || |
Sbjct: 278 tcgtgaaagcctgcccagaggatgtgccactgattcgccaattggagcaactatttccag 337
Query: 2185 cgccttggga 2194
||||||||||
Sbjct: 338 cgccttggga 347
>BF01022B2F09
Length = 779
Score = 1277 bits (644), Expect = 0.0
Identities = 656/660 (99%)
Strand = Plus / Plus
Query: 962 atcgagactaagagccgcaaaatcggcactgcagatatcgagatttgatacgtgcatcga 1021
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9 atcgagactaagagccgcaaaatcggcactgcagatagcgagatttgatacgtgcatcga 68
Query: 1022 acattgtcagcaacttctagaacaaaaatcatcagataaagaactctctgagctaatggc 1081
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 acattgtcaggaacttctagaacaaaaatcatcagataaagaactctctgagctaatggc 128
Query: 1082 tgatgccaaaaagaaaaagatggtggtggcgcgagatgaaagaaagaagaagaaggtgga 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgatgccaaaaagaaaaagatggtggtggcgcgagatgaaagaaagaagaagaaggtgga 188
Query: 1142 agccaagagaagcgaacagaaggatttagtcgtgaaagctgtaatccagcgcggcattaa 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agccaagagaagcgaacagaaggatttagtcgtgaaagctgtaatccagcgcggcattaa 248
Query: 1202 aatatccaaatgcgaagatgaagatgacatagatctatcaaagttagaaccaactttgcc 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aatatccaaatgcgaagatgaagatgacatagatctatcaaagttagaaccaactttgcc 308
Query: 1262 gggggctcaggagtctatagtacatttagagaatggcattttaaaatggccggtgctatt 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gggggctcaggagtctatagtacatttagagaatggcattttaaaatggccggtgctatt 368
Query: 1322 cctgtatccggaatatcagacgtccgatttcgtgaaagcctgcccagaggatgtgccact 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cctgtatccggaatatcagacgtccgatttcgtgaaagcctgcccagaggatgtgccact 428
Query: 1382 gattcgccaattggagcaactatttccagcgccttgggacgaggctaaaacttacaacgt 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gattcgccaattggagcaactatttccagcgccttgggacgaggctaaaacttacaacgt 488
Query: 1442 tagaagcattaacgtctattacgagggtagcgacaaaatgcctcacgtggttgatccgaa 1501
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tagaagcattaacgtttattacgagggtagcgacaaaatgcctcacgtggttgatccgaa 548
Query: 1502 aaagaatttaggtgaactgttagttgctaaatattatgaattgaaggccggcactcccgc 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaagaatttaggtgaactgttagttgctaaatattatgaattgaaggccggcactcccgc 608
Query: 1562 gtttttcgttatggtacgcggcagtcgggcggaaagcagatttatagaatgttatctgta 1621
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gtttttcattatggtacgcggcagtcgggcggaaagcagatttatagaatgttatctgta 668
Score = 186 bits (94), Expect = 1e-46
Identities = 211/250 (84%)
Strand = Plus / Plus
Query: 1945 tcgtgaaggctgtacttgagcgcggcattaaaatatctaaatgtaaaaataaaaatgaca 2004
||||||| |||||| | ||||||||||||||||||| ||||| || || || ||||||
Sbjct: 218 tcgtgaaagctgtaatccagcgcggcattaaaatatccaaatgcgaagatgaagatgaca 277
Query: 2005 tagatatatcaaaattagaaccaactttaccgggggctcgcgattctatggtatatttag 2064
||||| ||||||| |||||||||||||| |||||||||| || ||||| ||| ||||||
Sbjct: 278 tagatctatcaaagttagaaccaactttgccgggggctcaggagtctatagtacatttag 337
Query: 2065 agaatggcgttttaaaatggccgattctatttctatatccggaatatgaaacctcagatt 2124
|||||||| |||||||||||||| | ||||| || |||||||||||| | || || ||||
Sbjct: 338 agaatggcattttaaaatggccggtgctattcctgtatccggaatatcagacgtccgatt 397
Query: 2125 tcttgacaggctgcccagagaatgtgccactgatttatcaattggaaaaactgttcccgg 2184
|| ||| || |||||||||| |||||||||||||| |||||||| |||| || || |
Sbjct: 398 tcgtgaaagcctgcccagaggatgtgccactgattcgccaattggagcaactatttccag 457
Query: 2185 cgccttggga 2194
||||||||||
Sbjct: 458 cgccttggga 467
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 424,870
Number of extensions: 23358
Number of successful extensions: 23358
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 23358
Number of HSP's successfully gapped: 4
Length of query: 2896
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2878
Effective length of database: 8,109,745
Effective search space: 23339846110
Effective search space used: 23339846110
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)