BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00241 (UTR included)
(1690 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01004X1A08 1485 0.0
BF01028B1H10 402 e-112
BF14_1601_C1 96 2e-19
>BF01004X1A08
Length = 790
Score = 1485 bits (749), Expect = 0.0
Identities = 778/790 (98%)
Strand = Plus / Plus
Query: 465 ctgttggatgagtgagtgcgcccgcgaattttaaaaatgtcgtccttagcggtatttgat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttggatgagtgagtgcgcccgcgaattttaaaaatgtcgtccttagcggtatttgat 60
Query: 525 ttcgatcgtacgattgttcaggacgattcggataacaccattattaataaattacgtgaa 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcgatcgtacgattgttcaggacgattcggataacaccattattaataaattacgtgaa 120
Query: 585 aaaaagccgccaccagaatgggaagtgaccaaccaagactggactccgtacatgagcgac 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaagccgccaccagaatgggaagtgaccaaccaagactggactccgtacatgagcgac 180
Query: 645 gtgttcgagcacgcgtactcagcgggactccacccgagtcacatcctggacagcatcgcg 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgttcgagcacgcgtactcagcgggactccacccgagtcacatcctggacagcatcgcg 240
Query: 705 tccatgaggccgacccccgggatgcaggaactgttccgggagctacacgagcgaggctgg 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccatgaggccgacccccgggatgcaggaactgttccgggagctacacgagcgaggctgg 300
Query: 765 cacttgttggtcctcaccgacgctaacagcgtgttcgtcgaccactggctggacgctcac 824
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacttgttagtcctcaccgacgctaacagcgtgttcgtcgaccactggctggacgctcac 360
Query: 825 ggcctgaaggacacggtgacggcggtggtcaccaacaaggcgttctggaacaacaatcgt 884
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcttgaaggacacggtgacggcggtggtcaccaacaaggcgttctggaacaacaatcgt 420
Query: 885 ctcttcatcgagccctgcatgaggcagggttcctgcgctctctgccccacgaacttgtgc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcttcatcgagccctgcatgaggcagggttcctgcgctctctgccccacgaacttgtgc 480
Query: 945 aagacgctggccctggagcagttctgtgaggggaggagctaccggcgcctcgtgtactgc 1004
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaacgctggccctggagcagttctgtgaggggaggagctaccggcgcctcgtgtactgc 540
Query: 1005 ggtgacggcaggaacgactactgtcccgccaaacacttaccgtccacttcgaccgtgtac 1064
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgacggcaggaacgacttctgtcccgccaaacacttaccgtccacttcgaccgtgtac 600
Query: 1065 cctcggagcggcttccccctccacactctcataaagaacgagccgtcgtcagtgagcgcg 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cctcggagcggcttccccctccacactctcataaagaacgagccgtcgtcagtgagcgcg 660
Query: 1125 cgggtcgtgccctgggaggacgccttcgctatactgagagacttgttcaacgacaaacag 1184
||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 661 cgggtcgtgccctnnnangacgccttcgctatactgagagacttgttnnncgacaaacag 720
Query: 1185 aaataatggcggaattatcgaatgttatataataagttagaattagttaccttaatacaa 1244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaataatggcggaattatcgtatgttatataataagttagaattagttaccttaatacaa 780
Query: 1245 gttcgcgtcg 1254
||||||||||
Sbjct: 781 gttcgcgtcg 790
>BF01028B1H10
Length = 628
Score = 402 bits (203), Expect = e-112
Identities = 206/207 (99%)
Strand = Plus / Plus
Query: 846 gcggtggtcaccaacaaggcgttctggaacaacaatcgtctcttcatcgagccctgcatg 905
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gcggtggtcaccaacaaggcgttctggaacaacactcgtctcttcatcgagccctgcatg 60
Query: 906 aggcagggttcctgcgctctctgccccacgaacttgtgcaagacgctggccctggagcag 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggcagggttcctgcgctctctgccccacgaacttgtgcaagacgctggccctggagcag 120
Query: 966 ttctgtgaggggaggagctaccggcgcctcgtgtactgcggtgacggcaggaacgactac 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctgtgaggggaggagctaccggcgcctcgtgtactgcggtgacggcaggaacgactac 180
Query: 1026 tgtcccgccaaacacttaccgtccact 1052
|||||||||||||||||||||||||||
Sbjct: 181 tgtcccgccaaacacttaccgtccact 207
>BF14_1601_C1
Length = 1004
Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 1 taacgaagaatctgtcacatatttagttagtcttccaactgaatatat 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 taacgaagaatctgtcacatatttagttagtcttccaactgaatatat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,548
Number of extensions: 5245
Number of successful extensions: 5245
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5245
Number of HSP's successfully gapped: 3
Length of query: 1690
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1673
Effective length of database: 8,119,229
Effective search space: 13583470117
Effective search space used: 13583470117
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)