BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00244 (UTR included)
(2287 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B1A01 1402 0.0
>BF01026B1A01
Length = 755
Score = 1402 bits (707), Expect = 0.0
Identities = 734/743 (98%)
Strand = Plus / Plus
Query: 480 tttgaaaattattaattaaaaatgaaattattatctaaaatattccaacctgtgatcaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tttgaaaattattaattaaaaatgaaattattatctaaaatattccaacctgtgatcaca 72
Query: 540 atacctaagggtgcgaagataaagaacacggaaataacatgtaaaagtcagaaactcttg 599
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atacctaagggggcgaagataaagaacacggaaataacatgtaaaagtcagaaactcttg 132
Query: 600 ttagaatgcggtctggtccgtccaacgagcaccggtttcttcaccctgctaccgttggca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttagaatgcggtctggtccgtccaacgagcaccggtttcttcaccctgctaccgttggca 192
Query: 660 agacgagctctcaccaaattagaaaacattgtacaccgctgcttagaagacgtcggtgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agacgagctctcaccaaattagaaaacattgtacaccgctgcttagaagacgtcggtgct 252
Query: 720 caacagatatcactaccttgtctcacttccagcaggctatgggaagcgagcggacgttta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caacagatatcactaccttgtctcacttccagcaggctatgggaagcgagcggacgttta 312
Query: 780 gacagagttggctccgagttgttaaaagtagaagatagacacaacaagaagtatatatta 839
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gacaaagttggctccgagttgttaaaagtagaagatagacacaacaagaagtatatatta 372
Query: 840 agtccgactcacgaggaggccatcgccgacttgttgtccgatgtagctccgttgtcacac 899
|||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 373 agtccgactcacgaggagtccatcgctgacttgttgtctgatgtagctccgttgtcacac 432
Query: 900 aaacagttaccgttcatactgtaccagattggtaacaagtatcgtgacgagctccgtcct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaacagttaccgttcatactgtaccagattggtaacaagtatcgtgacgagctccgtcct 492
Query: 960 aagcacggtctgctgaggtcgagggagttcctcatgatggacgcctacagtgtacacacg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aagcacggtctgctgaggtcgagggagttcctcatgatggacgcctacagtgtacacacg 552
Query: 1020 gacacggacagcgcgctctgtacatacgacacactcacacacgcgtacaggaacgtgttc 1079
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gacacgaacagcgcgctctgtacatacgacacactcacacacgcgtacaggaacgtgttc 612
Query: 1080 agagaactgcggctgccggtgaggagagtggaggctccgtcgggtgacatgggaggcact 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agagaactgcggctgccggtgaggagagtggaggctccgtcgggtgacatgggaggcact 672
Query: 1140 ctctcccacgagtggcagctgccagctccctctggcgaggactgtctgtctgtgtgtccg 1199
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 673 ctctcccacgagtggcaactgccagctccctctggtgaggattgtctgtctgtgtgtccg 732
Query: 1200 tcttgctcacacaccaccttact 1222
|||||||||||||||||||||||
Sbjct: 733 tcttgctcacacaccaccttact 755
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,618
Number of extensions: 6020
Number of successful extensions: 6020
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6020
Number of HSP's successfully gapped: 1
Length of query: 2287
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2270
Effective length of database: 8,119,229
Effective search space: 18430649830
Effective search space used: 18430649830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)