BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00273 (UTR included)
(1699 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1F06 1497 0.0
>BF01056A1F06
Length = 789
Score = 1497 bits (755), Expect = 0.0
Identities = 779/789 (98%)
Strand = Plus / Plus
Query: 429 cttagagtcatttgttatcgtgtctcaaatcgttcgagtttaacatcttaaaagcaatcg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttagagtcatttgttatcgtgtctcaaatcgttcgagtttaacatcttaaaagcaatcg 60
Query: 489 caatataaaagaatgacgagggaatatcccaaggtttggtcttcgtttcaaagagttgct 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caatataaaagaatgacgagggaatatcccaaggtttggtcttcgtttcaaagagttgct 120
Query: 549 aaaaatgggaagactttgtcatttgaaataaaagatgttccggaagagctatggatcgaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaatgggaagactttgtcatttgaaataaaagatgttccggaagagctatggatcgaa 180
Query: 609 gcagttgaatttatgttgggaaattatataagagaagatgtttggtggattacagctggt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcagttgaatttatgttgggaaattatataagagaagatgtttggtggattacagctggt 240
Query: 669 acagccggggacccacaggctatagaagagtatcgtgtgctattgacgtctattataaag 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagccggggacccacaggctatagaagagtatcgtgtgctattgacgtctattataaag 300
Query: 729 ttgaagatgagtttgggatgctttcttgtcgaggaatctggtggtcgagtcctcgttggc 788
|||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||
Sbjct: 301 ttgaagatgagtttgggatgctttcttgtcaaggaatctggtgatcgagttctcgttggc 360
Query: 789 atgaatatgtgtatgccacaggaaaaagaacgctttgtggaacacaatccgccaaaaacg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgaatatgtgtatgccacaggaaaaagaacgctttgtggaacacaatccgccaaaaacg 420
Query: 849 aaagccggtctgctatcactgcgtatgttcagcgaggctgtgaaagtgccggcgatttac 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaagccggtctgctatcactgcgtatgttcagcgaggctgtgaaagtgccggcgatttac 480
Query: 909 gacaaatacaacgtcgatgtatacctcatgggagctggcctctctgtgactcctgaatac 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacaaatacaacgtcgatgtatacctcatgggagctggcctctctgtgactcctgaatac 540
Query: 969 agaggactgggattggcagtggagttgcttaaatctaggatgctccttacaaaagaagga 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaggactgggattggcagtggagttgcttaaatctaggatgctccttacaaaagaagga 600
Query: 1029 ggtttaagtgtcactggagggatattcacgagtgcaccggcgcagcgctcggctgaaaaa 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 601 ggtttaagtgtcactggagggatattcacgagtgcaccggcgcagcgctcggcgnnnnaa 660
Query: 1089 gctggcatggtttgtgtctaccagattccatacaaacaattcggtgagcaatgtaatatc 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gctggcatggtttgtgtctaccagattccatacaaacaattcggtgagcaatgtaatatc 720
Query: 1149 gactttaacacgactacggaagatttaaaaatatttgccatcaacgtataaaataacaat 1208
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 721 gactttaacacgactacggaaganntaaaaatatttgccatcaacgtataaaataacaat 780
Query: 1209 ggtgccatg 1217
|||||||||
Sbjct: 781 ggtgccatg 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,635
Number of extensions: 5229
Number of successful extensions: 5229
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5228
Number of HSP's successfully gapped: 1
Length of query: 1699
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1682
Effective length of database: 8,119,229
Effective search space: 13656543178
Effective search space used: 13656543178
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)