BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00306 (UTR included)
(7402 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_971_C1 2016 0.0
>BF14_971_C1
Length = 1049
Score = 2016 bits (1017), Expect = 0.0
Identities = 1041/1049 (99%)
Strand = Plus / Plus
Query: 5580 tccaaagtcttagggttgtttaagaagtttgaaactaaagaaaaaattaccgaaccgata 5639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaaagtcttagggttgtttaagaagtttgaaactaaagaaaaaattaccgaaccgata 60
Query: 5640 tcagagtacaaagtacccgaaaactcaggcaacggtgcaaatttaattaaaaatagtaat 5699
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tcagagtacaaagtacccgaaaactcaggcaacggtacaaatttaattaaaaatagtaat 120
Query: 5700 acctcaaaatccaatgttgattctgaggagaaagctaaacgacccacttctcttttatta 5759
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctcaaaatccaatgttgattccgaggagaaagctaaacgacccacttctcttttatta 180
Query: 5760 aatggtttagggcgtaagaataggtatagcaggtcgtctagtgatgacaacagtaaagaa 5819
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 aatggtttagggcgtaagaataggtatagcaggtcgtctagtgatgacaacggtaaagaa 240
Query: 5820 atagttgaaaacgaagaccagcaagtacttaaaaagaaggaagctgataccaaaaatatc 5879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagttgaaaacgaagaccagcaagtacttaaaaagaaggaagctgataccaaaaatatc 300
Query: 5880 agaaatactctaagattagatttctcacgattgccaagagtaaagaaaatagttcctacg 5939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaatactctaagattagatttctcacgattgccaagagtaaagaaaatagttcctacg 360
Query: 5940 aatcctgtgatagaacctcaaatttttaataactctgatattgaaaaggataccgatatt 5999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatcctgtgatagaacctcaaatttttaataactctgatattgaaaaggataccgatatt 420
Query: 6000 atagaaaaaaatggaattgtaaatgaccataagtcgaatgtagatttaagtgatactcaa 6059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagaaaaaaatggaattgtaaatgaccataagtcgaatgtagatttaagtgatactcaa 480
Query: 6060 acacgcagtcgatctagaagtagatcgacctattccaattctgatatgaaatcagactta 6119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 acacgcagtcgatctagaagtagatcgacctattccaattctgatatcaaatcagactta 540
Query: 6120 ggtgttaaagaaaagaaagttgtctctgatgttcctcttccccactgtaatgtacggagt 6179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgttaaagaaaagaaagttgtctctgatgttcctcttccccactgtaatgtacggagt 600
Query: 6180 cacgaatcgctaacacctgaaaaggaagatatcgtagacaggatacgtagaaaaagtttt 6239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cacgaatcggtaacacctgaaaaggaagatatcgtagacaggatacgtagaaaaagtttt 660
Query: 6240 tattctcgattcaatgaaaagaaacagaggaggaaaagcaatttggtaggacctggagca 6299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tattctcgattcaatgaaaagaaacagaggaggaaaagcaatttggtaggacctggagca 720
Query: 6300 gttgaatacgatccattggcaagaatacactctcaagtatcggaatctaagtatgacaca 6359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttgaatacgatccattggcaagaatacactctcaagtatcggaatctaagtatgacaca 780
Query: 6360 tctccgacatcgccgggagcttatgatttatctcctggactatcagttggctccgatgta 6419
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 781 tctccgacatcgccgggaacttacgatttatctcctggactatcagttggctccgatgta 840
Query: 6420 tcgccatccacagaacgctatagatctctcttaacagatttgtcattaaacacaagaaac 6479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tcgccatccacagaacgctatagatctctcttaacagatttgtcattaaacacaagaaac 900
Query: 6480 aattccagatacgacggtgggaacgataaaattgatatgtaccgatccctcgacagaaac 6539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 901 aattccagatacgacggtgggaacgaaaaaattgatatgtaccgatccctcgacagaaac 960
Query: 6540 gacttcagaaaatatccaagcagcaagagctatttagattacgaacaaccgctatcgtac 6599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gacttcagaaaatatccaagcagcaagagctatttagattacgaacaaccgctatcgtac 1020
Query: 6600 aatcccaaccgatattccaggacgaaatc 6628
|||||||||||||||||||||||||||||
Sbjct: 1021 aatcccaaccgatattccaggacgaaatc 1049
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 107,449
Number of extensions: 12387
Number of successful extensions: 12387
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12387
Number of HSP's successfully gapped: 1
Length of query: 7402
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7384
Effective length of database: 8,109,745
Effective search space: 59882357080
Effective search space used: 59882357080
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)