BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00323 (UTR included)
(4867 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A2H10 1144 0.0
>BF01019A2H10
Length = 605
Score = 1144 bits (577), Expect = 0.0
Identities = 598/605 (98%)
Strand = Plus / Plus
Query: 3278 taatacgatcgacaaatttctatgtcccactcctgttattgaagctcagaagaaaaatgt 3337
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 1 taatacgatcgacaaatttctatgtcccactcctattattgaagctcagaagaaaactgt 60
Query: 3338 tagcaaaagtagaagtacagaaaaagaaatcaaaaacacagagcaggaaaacaatggaaa 3397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcaaaagtagaagtacagaaaaagaaatcaaaaacacagagcaggaaaacaatggaaa 120
Query: 3398 agatagaggaaacagaagaaaagatagcaaaagtacagacaacacaagcagaaatagtga 3457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatagaggaaacagaagaaaagatagcaaaagtacagacaacacaagcagaaatagtga 180
Query: 3458 caaggtaaacaaaaacaaggatatagatactaaagaaaagaacagaacaagtgcagagac 3517
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 caaggtaaacaaaaacaaggatatagacactaaagaaaagaacagaacaagtgcagagac 240
Query: 3518 gagaaatcaaacaaggagtatggagaataacaaaaaggaaataccggtggaattagaagt 3577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagaaatcaaacaaggagtatggagaataacaaaaaggaaataccggtggaattagaagt 300
Query: 3578 tagacggagcaagaggcaaagaacggctaaaaggagctttgagatagaatcaaggacatc 3637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagacggagcaagaggcaaagaacggctaaaaggagctttgagatagaatcaaggacatc 360
Query: 3638 gaaaactaatcatgaacagagcacagtgtataatatctcatcagaatctggtattgactc 3697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaaactaatcatgaacagagcacagtgtataatatctcatcagaatctggtattgactc 420
Query: 3698 tcccaacaagctaaagagacaggctagtgatatcagtctaccgagctctaagaagaccaa 3757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcccaacaagctaaagagacaggctagtgatatcagtctaccgagctctaagaagaccaa 480
Query: 3758 aacgtgcaacggttcaaatatcacattaagggccacgcctgctagaaagattaagacgca 3817
||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 481 aacgtgcaacggttcaaatatcacattaagggcgacacctgctaggaagattaagacgca 540
Query: 3818 gtacgtactctttacagcattcccatgtgacgaggtcaaagttaaattggaaaagttggg 3877
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtacgtactcttcacagcattcccatgtgacgaggtcaaagttaaattggaaaagttggg 600
Query: 3878 ggcag 3882
|||||
Sbjct: 601 ggcag 605
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 624,824
Number of extensions: 12990
Number of successful extensions: 12990
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12990
Number of HSP's successfully gapped: 1
Length of query: 4867
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4849
Effective length of database: 8,109,745
Effective search space: 39324153505
Effective search space used: 39324153505
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)