BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00324 (UTR included)
(1822 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B2C10 593 e-169
>BF01022B2C10
Length = 790
Score = 593 bits (299), Expect = e-169
Identities = 314/318 (98%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 1190 ggatcttcttctaggtgacgcgtcaaaagccaaacagaaattaggttggaccaacaaaac 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggatcttcttctaggtgacgcgtcaaaagccaaacagaaattaggttggaccaacaaaac 534
Query: 1250 caccttcgaagagctggtcaaagatatggtggaggccgaccttgaactcatgaagaaaaa 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 caccttcgaagagctggtcaaagatatggtggaggccgaccttgaactcatgaagaaaaa 594
Query: 1310 ccccgaggcataaatttttatattctaagagtgataatgaacggtgcactgtattttgca 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ccccgaggcataaatttttatattctaagagtgataatgaacggtgcactgtattttgca 654
Query: 1370 ccttatataatttaataataacaactatttaatttacttagcatttacttttatatataa 1429
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 655 ccttatataatttaataataacagctatttaatttacctagcatttacttttatatataa 714
Query: 1430 atttgccgccagtgttatgaataatagtcacagatatgctagctatgtatatatatatat 1489
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 715 atttgccgccagtgttatgaataatagtcacagatatgctagctatg--tatatatatat 772
Query: 1490 gtatatagatatatatat 1507
||||||||||||||||||
Sbjct: 773 gtatatagatatatatat 790
Score = 145 bits (73), Expect = 3e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1119 actggtcacgataaacatacggaccaactactcgttaaggtcaacccaaaatatttcaga 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 actggtcacgataaacatacggaccaactactcgttaaggtcaacccaaaatatttcaga 70
Query: 1179 cccacggaagtgg 1191
|||||||||||||
Sbjct: 71 cccacggaagtgg 83
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,314
Number of extensions: 17750
Number of successful extensions: 17750
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17749
Number of HSP's successfully gapped: 2
Length of query: 1822
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1805
Effective length of database: 8,119,229
Effective search space: 14655208345
Effective search space used: 14655208345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)