BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00366 (UTR included)
(1309 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2F04 803 0.0
BF01051A2B09 436 e-122
>BF01051A2F04
Length = 870
Score = 803 bits (405), Expect = 0.0
Identities = 408/409 (99%)
Strand = Plus / Minus
Query: 66 ttgtaaacaggccttctcgttttagaatcttcatcctggatttttactagttttaattca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttgtaaacaggccttctcgttttagaatcttcatcctggatttttactagttttaattca 350
Query: 126 cgcctagttgataaactttgagcacttttaaggtcggtaatcgttatagaattgtcgcta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cgcctagttgataaactttgagcacttttaaggtcggtaatcgttatagaattgtcgcta 290
Query: 186 ccaatcaaggttattctgttttcaaaaacctttttctttggtatatctttgccatcagca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccaatcaaggttattctgttttcaaaaacctttttctttggtatatctttgccatcagca 230
Query: 246 gtgatcctggttgcgattgatcggcattccaatacgcgtctagcacttaataaattacgc 305
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 229 gtgatcctggttgcgattgatcggcattccaatacgcgtcttgcacttaataaattacgc 170
Query: 306 aatttgttcattgtttacagtggtattgtgatgtagtaataaaaatatatatttctgaaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aatttgttcattgtttacagtggtattgtgatgtagtaataaaaatatatatttctgaaa 110
Query: 366 tattccttataaatcagatataatgactattgtttaaaattttaaagaatatcatattca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tattccttataaatcagatataatgactattgtttaaaattttaaagaatatcatattca 50
Query: 426 catttctcgaaggttatgattactatattatagtaaataactaataagt 474
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 catttctcgaaggttatgattactatattatagtaaataactaataagt 1
>BF01051A2B09
Length = 295
Score = 436 bits (220), Expect = e-122
Identities = 235/241 (97%)
Strand = Plus / Plus
Query: 625 tttcagttttgacagcagggaagacaaccatgtcggcccacaagacatttattattaagc 684
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 tttcagttttgacagcnnngaagacaaccatgtcggcccacaagacatttattattaagc 91
Query: 685 ggaagcttgcaaaaaagctaaaacaaaacagacctatcccgcaatgggttagaatgcgca 744
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 92 ggaagcttgcaaaaaagctaaaacaaaacagacctatcccgcaatgggttaaaatgcgca 151
Query: 745 ctggtaacacaattcgttacaacgccaagaggcgtcactggaggaggaccaagctcaagc 804
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 152 ctggaaacacaattcgttacaacgccaagaggcgtcactggaggagaaccaagctcaagc 211
Query: 805 tgtaagcttgaatctactgtcttgtatctgttaagtgaataaatttatgtaaacacttaa 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tgtaagcttgaatctactgtcttgtatctgttaagtgaataaatttatgtaaacacttaa 271
Query: 865 a 865
|
Sbjct: 272 a 272
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,317
Number of extensions: 18026
Number of successful extensions: 18026
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 18026
Number of HSP's successfully gapped: 2
Length of query: 1309
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1292
Effective length of database: 8,119,229
Effective search space: 10490043868
Effective search space used: 10490043868
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)