BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00386 (UTR included)
(3364 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A1C03 1447 0.0
>BF01023A1C03
Length = 769
Score = 1447 bits (730), Expect = 0.0
Identities = 754/762 (98%)
Strand = Plus / Plus
Query: 457 ttttgtctaaaagttctattaaaaatattactctggtttaaataatggtgtctgaaacag 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 ttttgtctaaaagttctattaaaaatattactctggtttaaataatggtgtctgaaacag 67
Query: 517 aattaataccttatctatgtaattacgatacccaaacaaaacatttagaatcggaaacaa 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aattaataccttatctatgtaattacgatacccaaacaaaacatttagaatcggaaacaa 127
Query: 577 taaaacaattatggtcggggacgtggtctattgagaacattggcctttgtttaaaattga 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 taaaacaattatggtcggggacgtggtctattgagaacattggcctttgtttaaaattga 187
Query: 637 tagatggattaaagtctggcagcttagacgaaactattacaaattatataaatgagaatg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tagatggattaaagtctggcagcttagacgaaactattacaaattatataaatgagaatg 247
Query: 697 gaacatcggaatcagttttacaaatagctatatctttatttttacaattttgtgtcagga 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gaacatcggaatcagttttacaaatagctatatctttatttttacaattttgtgtcagga 307
Query: 757 attggaattcacacccagagaacttaaatttatcagaatacttaggtgtaaactggccag 816
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 308 attggaattcacacccagagaacttaaatttatcagaatacttaggtgtaaactggccgg 367
Query: 817 aagctttggatgttaatgtgttactgcagcaggattccgaacctatatatgttaatatag 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aagctttggatgttaatgtgttactgcagcaggattccgaacctatatatgttaatatag 427
Query: 877 tgtatcctgaattattgtatttttctggaaaaatattttctactctatgttctattgagc 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgtatcctgaattattgtatttttctggaaaaatattttctactctatgttctattgagc 487
Query: 937 caagttggttgcatctctggtggaatcttcgattcttgagtacacatcagagagctcttg 996
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 488 caagttggttgcatctctggtggaatcttcgaatcttgagtacacatcagagggctcttg 547
Query: 997 aagacacgagcgcctcgctgtataatgaaagtgaactgattatagccaaactctgcaatg 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aagacacgagcgcctcgctgtataatgaaagtgaactgattatagccaaactctgcaatg 607
Query: 1057 aatcccagaggtttgaagatggttgtctcaaagtactgctgtacatagagattgcacaat 1116
|||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 608 aatcccagaggtttgaagatagtcgtctcaaagtactgctgtacatggagattgcacaat 667
Query: 1117 tatatttgctgtacgctagagttcaaaaagttgaagagtatttattaaaggcgcgggaac 1176
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 tatatttgctgtacgctagagttcaaaaagttgaagagtatctattaaaggcgcgggaac 727
Query: 1177 tggctggattgaaacttgaattgacaggtatcctcggcaaga 1218
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 728 tggctggattgaaacttgaattgacaggtatccttggcaaga 769
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 431,491
Number of extensions: 14520
Number of successful extensions: 14520
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14520
Number of HSP's successfully gapped: 1
Length of query: 3364
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3346
Effective length of database: 8,109,745
Effective search space: 27135206770
Effective search space used: 27135206770
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)