BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00387 (UTR included)
(1936 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2D10 1302 0.0
>BF01045A2D10
Length = 730
Score = 1302 bits (657), Expect = 0.0
Identities = 694/705 (98%), Gaps = 6/705 (0%)
Strand = Plus / Plus
Query: 71 taatggtgaactacagtaaaattgcatagttagtgagttgcattctaaaatggcagcatc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatggtgaactacagtaaaattgcatagttagtgagttgcattctaaaatggcagcatc 60
Query: 131 aaatgaggaagaaattttggagggttttctgtgtccaatttgcaaagcagatttaaaatc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgaggaagaaattttggagggttttctgtgtccaatttgcaaagcagatttaaaatc 120
Query: 191 agctagccagcttaccaatcattttgaaagcttgcaccaagaagagcaggacgttctcaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctagccagcttaccaatcattttgaaagcttgcaccaagaagagcaggacgttctcaa 180
Query: 251 atcattgaaggaaatatttggtaaagcaaagaagataattttaaacaatgacgatacaga 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcattgaaggaaatatttggtaaagcaaagaagataattttaaacaatgacgatacaga 240
Query: 311 tttgaaggaaacctttgatcgcgccttgaagttcagttcccaagaacaatattatgctag 370
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 tttgaaggaaacctttgatcgcgccttgaagttcagttcccaagaacaatattgtgctag 300
Query: 371 ggaggagcagacagttggagtgtcgcgaagttccactgattatttcaaggctgttcgttc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaggagcagacagttggagtgtcgcgaagttccactgattatttcaaggctgttcgttc 360
Query: 431 agctagattagagagatatgccacggaaactaataagttgttaataagattagataaact 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctagattagagagatatgccacggaaactaataagttgttaataagattagataaact 420
Query: 491 ggtatgtaatatgccaagtgatccaaaccaaaggaaacagcatgaacaggaagttgttcc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtatgtaatatgccaagtgatccaaaccaaaggaaacagcatgaacaggaagttgttcc 480
Query: 551 ttggttggatgggtcgtctgtgaagttatgtccaaactgtgctaaagctttcaacctgac 610
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 ttggttggatgggtcgtctgtgaagttatgtccaaactgtgctaaagctttcaatctgac 540
Query: 611 gaggcggaagcatcattgtagactctgtggttcaattctatgccatgactgttcagtgtt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaggcggaagcatcattgtagactctgtggttcaattctatgccatgactgttcagtgtt 600
Query: 671 cttagatttaaatgttgctagta-aat-----atccgtctgcacctcctcaaccagaaac 724
|||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 601 cttagatttaaatgttgctaaaacaatagtggatccgtctgcacctcctcaaccagaaac 660
Query: 725 atcagcggtcgagaagtttggtctccgtctctgtgaacactgcta 769
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 661 atcagcggttgagaagtttggtctccgtctctgtgaacactgcta 705
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,117
Number of extensions: 4940
Number of successful extensions: 4940
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4940
Number of HSP's successfully gapped: 2
Length of query: 1936
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1919
Effective length of database: 8,119,229
Effective search space: 15580800451
Effective search space used: 15580800451
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)