BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00390 (UTR included)
(1624 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 115 2e-25
BF01043B1E03 86 2e-16
>BF14_335_C2
Length = 1827
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Plus
Query: 1079 gaacctactagggcttcctccgaagtacgttccaagaatgaattgatattagttctggac 1138
||||||||||| ||| || |||||||||||| ||||||||| || | ||||||||||||
Sbjct: 997 gaacctactagagctgtcttcgaagtacgttcgaagaatgaactggtgttagttctggac 1056
Query: 1139 aggcccaagtattttagtaggttgtagagatattttgtagttatacctct 1188
||||||||||||||||||||| |||||||| |||| | |||||||||||
Sbjct: 1057 aggcccaagtattttagtaggctgtagagagatttagctgttatacctct 1106
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1285 tttggggatgttggttttccaaggaaccgtaagctgtataatcacaacgcgctttaaaat 1344
||||||||||||||| ||||||||||||||| ||| ||| | | | |||||||||||||
Sbjct: 1198 tttggggatgttggtcttccaaggaaccgtaggctctattagcgtagcgcgctttaaaat 1257
Query: 1345 tcgcga 1350
||||||
Sbjct: 1258 tcgcga 1263
>BF01043B1E03
Length = 830
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 1102 agtacgttccaagaatgaattgatattagttctggacaggcccaagtattttagtaggtt 1161
|||||||||||||||||| ||||| |||||||||| ||||| ||||| ||| ||||||||
Sbjct: 298 agtacgttccaagaatgatttgatgttagttctgggcaggctcaagtgtttcagtaggtt 239
Query: 1162 gtagaga 1168
|||||||
Sbjct: 238 gtagaga 232
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 176,944
Number of extensions: 3064
Number of successful extensions: 3064
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3063
Number of HSP's successfully gapped: 3
Length of query: 1624
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1607
Effective length of database: 8,119,229
Effective search space: 13047601003
Effective search space used: 13047601003
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)