BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00438 (UTR included)
(2578 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B1H09 1503 0.0
BF01016B1H12 876 0.0
>BF01042B1H09
Length = 802
Score = 1503 bits (758), Expect = 0.0
Identities = 792/802 (98%), Gaps = 1/802 (0%)
Strand = Plus / Plus
Query: 464 ttgtttgtttggttcggattaagtctgttta-aaaaaaatgtataacaaaacgagcgcca 522
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ttgtttgtttggttcggattaagtctgtttataaaaaaatgtataacaaaacgagcgcca 60
Query: 523 ctttgatgctacagactattatagtgttgatggaaaagcagaattccacggtgactaatt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttgatgctacagactattatagtgttgatggaaaagcagaattccacggtgactaatt 120
Query: 583 tcccatctacgtttcttgaggacgctgaggttgagagatgttacggtttgtacggatgtt 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccatctacgtttcttgaggacgctgaggttgagagatgttacggtttgtacggatgtt 180
Query: 643 tctcgaaggcgtatccgtggacggaacatcgtcccgacaattacttcccagcgtcaccag 702
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 tctcgaaggcgtatccgtggacggaacatcgtcctgacaattacttcccagcgtcaccag 240
Query: 703 aaagcttaggagtgagatacgctgtatttacaagaagaaacagaaaaatacctgttctat 762
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagcttaagagtgagatacgctgtatttacaagaagaaacagaaaaatacctgttctat 300
Query: 763 tacacgcagatgatacggcaaagataaaaaatgcgaatctcgatagttctggtccattct 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacacgcagatgatacggcaaagataaaaaatgcgaatctcgatagttctggtccattct 360
Query: 823 atttcatatcacacggcttcctggaaggcgggcataaactttggatacaacatatggcag 882
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttcatatcccacggcttcctggaaggcgggcataaactttggatacaacatatggcag 420
Query: 883 atgctcttctgaatcttaaaggcaatgacgcagctactgtagttgtggttgattggagac 942
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgcccttctgaatcttaaaggcaatgacgcagctactgtagttgtggttgattggagac 480
Query: 943 gtggttcgcagcctccctacggccaagcagtcgctaacatcagactagtcggcgctatga 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggttcgcagcctccctacggccaagcagtcgctaacatcagactagtcggcgctatga 540
Query: 1003 cggctcatttgataaaaaatatatacgatgtgttgcaattgacaaatttagacgctttcc 1062
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 cggctcatttgataaaaaatatatacgatgtgttacaattgacaaatttagacgctttcc 600
Query: 1063 attttattggacactctttgggcgcacatttaggagggtactgcgggcatgctcttcaaa 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attttattggacactctttgggcgcacatttaggagggtactgcgggcatgctcttcaaa 660
Query: 1123 agaaatttaacctaaaattaggaaggataactggtttggatcccgcggcgccatacttca 1182
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 661 agaaatttaatctaaaattaggcaggataactggtttggatcccgcggcgccgtacttca 720
Query: 1183 gtaacactgttacgttggttcgtttggataaatccgacgctcaatacgtagacatcatac 1242
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 721 gtaacactgttacgttggttcgtttggataaatctgacgctcaatacgtagacatcatac 780
Query: 1243 atagcaatgccatgccactgta 1264
||||||||||||||||||||||
Sbjct: 781 atagcaatgccatgccactgta 802
>BF01016B1H12
Length = 534
Score = 876 bits (442), Expect = 0.0
Identities = 494/508 (97%), Gaps = 5/508 (0%)
Strand = Plus / Plus
Query: 1790 tatgaatgacgagcaaaaatattaccggccaggtgatatagaaaataaacttctcgcttt 1849
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tatgaatgacgagcaaaaatattaccggccaggtgatatagaaaataaacttcttgcttt 60
Query: 1850 caaagatacgggtcttccgccagtgtcagtgattgctgaatggaaatatgaaacaagtat 1909
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaagatacgggtcttccgcctgtgtcagtgattgctgaatggaaatatgaaacaagtat 120
Query: 1910 attgaacccaatgacttggaggttgttgaagtcatctagcatttacattgaatacattaa 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgaacccaatgacttggaggttgttgaagtcatctagcatttacattgaatacattaa 180
Query: 1970 aatatcatcaatagagtacaacactgttatgaccgtttgtccgaaacttaaaaaacccgt 2029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatatcatcaatagagtacaacactgttatgaccgtttgtccgaaacttaaaaaacccgt 240
Query: 2030 ggttacaaacttgcagacgattatgaagactaaatattgtgcgttttgaaatttaaaaaa 2089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttacaaacttgcagacgattatgaagactaaatattgtgcgttttgaaatttaaaaaa 300
Query: 2090 aa--aaacataagctcaatattcaaagcaaatccaatgtgcaatgatatcaaatgaaata 2147
|| | | |||||| ||||||| |||||||| |||| |||||||||||||||| |||||
Sbjct: 301 aaacataaataagcacaatattaaaagcaaacccaa--tgcaatgatatcaaataaaata 358
Query: 2148 tatatcaaattcaggacttaaaagtattgttttagta-ttttttacttgtaaggtgttta 2206
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 359 tatatcaaattcaggacttaaaagtattgttttagtatttttttacttgtaaggtgttta 418
Query: 2207 ctttgtttttggtgttaccatagtgtatattaagattaatttaaaaagtactgtaaatat 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctttgtttttggtgttaccatagtgtatattaagattaatttaaaaagtactgtaaatat 478
Query: 2267 aattttaatattaaaataaactatttga 2294
||||||||||||||| ||||||||||||
Sbjct: 479 aattttaatattaaagtaaactatttga 506
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 357,229
Number of extensions: 9030
Number of successful extensions: 9030
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9026
Number of HSP's successfully gapped: 2
Length of query: 2578
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2561
Effective length of database: 8,119,229
Effective search space: 20793345469
Effective search space used: 20793345469
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)