BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN00455 (UTR included)
         (1474 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01047B2H03                                                           96   2e-19
BF14_335_C2                                                            68   4e-11

>BF01047B2H03
          Length = 758

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                       
Query: 504 atacgtgaagcggttagtctttcggtagcaaaagcgcaaaaagaaataaccacaaaccag 563
           |||| ||||||||||||| ||| |||||  |  ||| ||||||||||||||||||||  |
Sbjct: 249 atacatgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacggg 190

                                                                       
Query: 564 cgatcaatagcttttgtgagagaaggcactagtgctacaaaatcaaacgtcaagctttac 623
           |||| ||| | |||||||||||||| || ||| |||| ||| |||||| |||||| ||||
Sbjct: 189 cgattaattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttac 130

                       
Query: 624 tctatcattaaa 635
           |||||| |||||
Sbjct: 129 tctatccttaaa 118


>BF14_335_C2
          Length = 1827

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                  
Query: 748  acggttcgttgggaaaccaacatccccaaagaccataccatcaaggtcaacaag 801
            ||||||| |||| | ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1227 acggttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaag 1174


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 188,445
Number of extensions: 4146
Number of successful extensions: 4146
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4146
Number of HSP's successfully gapped: 2
Length of query: 1474
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1457
Effective length of database: 8,119,229
Effective search space: 11829716653
Effective search space used: 11829716653
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)