BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00460 (UTR included)
(2149 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2B02 1413 0.0
>BF01021B2B02
Length = 793
Score = 1413 bits (713), Expect = 0.0
Identities = 734/741 (99%)
Strand = Plus / Plus
Query: 471 tctgtttttgtggagttataatttataaaaatgaagaaatggtggaattggattcttgtt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tctgtttttgtggagttataatttataaaaatgaagaaatggtggaattggattcttgtt 112
Query: 531 gtggccttagtgtgtttgttattcgttgctatacctctttcatatcccgataggactaaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gtggccttagtgtgtttgttattcgttgctatacctctttcatatcccgataggactaaa 172
Query: 591 gaatcccttcgtcccatgtttgatgagtatatagaaaatttcaataaaacttataaggac 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gaatcccttcgtcccatgtttgatgagtatatagaaaatttcaataaaacttataaggac 232
Query: 651 gaccccgccgagtacgaaaaaagattagagcattttgtggcctccgtaaaagagatagat 710
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaccccgcagagtacgaaaaaagattagagcattttgtggcctccgtaaaagagatagat 292
Query: 711 agattgaactcagcagcaagaggtcccgaacagcacagggcgaggtatggactcacacaa 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agattgaactcagcagcaagaggtcccgaacagcacagggcgaggtatggactcacacaa 352
Query: 771 atgtcagatatgtcgaaagatgaattcagagatgtacatctatcagacgaacaacctcat 830
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 353 atgtcagatatgtcgaaagatgaattcagagatatacatctatctgacgaacaacctcat 412
Query: 831 cgatatagaagacataagctagggaagagttggagcaaaggtagagtgaaggatattgag 890
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 413 cgatatagaagacataagctaggaaagagttggagcaaaggtagagtgaaggatattgag 472
Query: 891 gacgtggccgataacatggatgattacgatgatgaggatgatgatgataaggagggtagt 950
||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 473 gacgttgccgataacatagatgattacgatgatgagggtgatgatgataaggagggtagt 532
Query: 951 ccgcatcataatatttatattgtcatcagaaagaaacgcgccatgctaccacttcaggtt 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ccgcatcataatatttatattgtcatcagaaagaaacgcgccatgctaccacttcaggtt 592
Query: 1011 gattggagaactaagggtgtgataggtcccgtacgcgatcagggtctgtgtggagcgtgc 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gattggagaactaagggtgtgataggtcccgtacgcgatcagggtctgtgtggagcgtgc 652
Query: 1071 tgggctttcagtacgattggcacaatggaagccatggctgccatagacaccggcaagctt 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgggctttcagtacgattggcacaatggaagccatggctgccatagacaccggcaagctt 712
Query: 1131 aacacgctcagtgtccaggaagttatagactgcgctggtttggggaacagcggttgtgct 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aacacgctcagtgtccaggaagttatagactgcgctggtttggggaacagcggttgtgct 772
Query: 1191 ggtggcgatatatgcctttta 1211
|||||||||||||||||||||
Sbjct: 773 ggtggcgatatatgcctttta 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 378,401
Number of extensions: 11580
Number of successful extensions: 11580
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11580
Number of HSP's successfully gapped: 1
Length of query: 2149
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2132
Effective length of database: 8,119,229
Effective search space: 17310196228
Effective search space used: 17310196228
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)