BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00462 (UTR included)
(2317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2B02 218 3e-56
>BF01021B2B02
Length = 793
Score = 218 bits (110), Expect = 3e-56
Identities = 116/118 (98%)
Strand = Plus / Minus
Query: 3 acacactaaggccacaacaagaatccaattccaccatttcttcatatttaaaaattataa 62
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 127 acacactaaggccacaacaagaatccaattccaccatttcttcatttttataaattataa 68
Query: 63 ctccacaaaaacagaaaacacgtccagttcgagaagcaggtccaacaagattcaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ctccacaaaaacagaaaacacgtccagttcgagaagcaggtccaacaagattcaaagt 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,661
Number of extensions: 4801
Number of successful extensions: 4801
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4801
Number of HSP's successfully gapped: 1
Length of query: 2317
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2300
Effective length of database: 8,119,229
Effective search space: 18674226700
Effective search space used: 18674226700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)