BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00466 (UTR included)
(1966 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B1G06 1342 0.0
BF01055B2C04 492 e-138
>BF01026B1G06
Length = 747
Score = 1342 bits (677), Expect = 0.0
Identities = 723/737 (98%), Gaps = 1/737 (0%)
Strand = Plus / Plus
Query: 327 agtttaaaaaattcgaagacattaaaattaaattttggcatataacaataatttcgtcca 386
|||||||||||| |||| |||||||||||||||||||| ||| |||||||||||| ||||
Sbjct: 12 agtttaaaaaat-cgaacacattaaaattaaattttggtataaaacaataatttcatcca 70
Query: 387 gaaaaaaaatttcaaaattattcaagtggttttgtgaatactatgataaattagggttat 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gaaaaaaaatttcaaaattattcaagtggttttgtgaatactatgataaattagggttat 130
Query: 447 gtaatctataaattttaataaaaaccagctataatgtcctccaggattagatttatgtgg 506
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 131 gtaatctataaattttaataaaaatcagctataatgtcctccaggattagatttatgtgg 190
Query: 507 aggagaataaacccgattaaattaaattataaatccagatgctcagctataatacctata 566
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 191 aggagaataaacccgattaaattaaattataaatccagatgctcagctctaatacctata 250
Query: 567 ttgacaccaaaaaccgttagggccacagttccttacacattaggtttctcacttctcact 626
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgacaccaaaaaccattagagccacagttccttacacattaggtttctcacttctcact 310
Query: 627 ctgattggtctagaaaaaaaattaaacgccgaagatgaattaatcatgacaataaaacac 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctgattggtctagaaaaaaaattaaacgccgaagatgaattaatcatgacaataaaacac 370
Query: 687 tgtattctctttatacaaagaaatgaatttgataaggcagagcagttgttacatgttgca 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgtattctctttatacaaagaaatgaatttgataaggcagagcagttgttacatgttgca 430
Query: 747 ttgagacaggcacagcaaataaatcatcagctcggtgtaacatatgtatatgatgtcatg 806
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 431 ttgagacaggcacagcaaataaatcatcagctcggtgtaacatacgtatatgatgttatg 490
Query: 807 gcaaacttagctctagaaagagagcaatatagtaaagcaaagcagttgtttgtagcagtt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcaaacttagctctagaaagagagcaatatagtaaagcaaagcagttgtttgtagcagtt 550
Query: 867 tctcagagattattggccgatggaacagctgaggatgatccgcgattaattcatataagc 926
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcccagagattattggccgatggaacagctgaggatgatccgcgattaattcatataagc 610
Query: 927 gccaaattagcaagaataagccatatgcaacatgaatatacaacagctcagctgggctat 986
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 611 gccaaattagcaagaataagccatatgcaacatgaatatacaacagctcagctgggttac 670
Query: 987 gattggtgcttagagaaactgagcgctgtcatagatagagatccaaatgagaattttaaa 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gattggtgcttagagaaactgagcgctgtcatagatagagatccaaatgagaattttaaa 730
Query: 1047 cagttgcaagctatgat 1063
|||||||||||||||||
Sbjct: 731 cagttgcaagctatgat 747
>BF01055B2C04
Length = 668
Score = 492 bits (248), Expect = e-138
Identities = 251/252 (99%)
Strand = Plus / Minus
Query: 1598 tatttaatgcacatgtatgtacatatataaaaataaaattacatgttacagttaaatgca 1657
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 658 tatttaatgcacatgtatgtacgtatataaaaataaaattacatgttacagttaaatgca 599
Query: 1658 ctggatattaatgttgacaagttctattacttttttttttaattaaaataaaattatttt 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctggatattaatgttgacaagttctattacttttttttttaattaaaataaaattatttt 539
Query: 1718 cattgagcactttcttttgatacagcaaaaggttctgatacaacttccgctgatgagttt 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cattgagcactttcttttgatacagcaaaaggttctgatacaacttccgctgatgagttt 479
Query: 1778 gttattacgacatccttaactggccggtcatttgctccagttaccgtcttttcaatctta 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gttattacgacatccttaactggccggtcatttgctccagttaccgtcttttcaatctta 419
Query: 1838 cgcaccacatcc 1849
||||||||||||
Sbjct: 418 cgcaccacatcc 407
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,575
Number of extensions: 9227
Number of successful extensions: 9227
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9222
Number of HSP's successfully gapped: 2
Length of query: 1966
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1949
Effective length of database: 8,119,229
Effective search space: 15824377321
Effective search space used: 15824377321
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)