BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00519 (UTR included)
(1880 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_55_C1 2452 0.0
>BF14_55_C1
Length = 1296
Score = 2452 bits (1237), Expect = 0.0
Identities = 1261/1269 (99%)
Strand = Plus / Plus
Query: 493 aggaaacgatgtcgcgatttttaccgtattttctggctgtatgcgtcgcggtatgctcag 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 aggaaacgatgtcgcgatttttaccgtattttctggctgtatgcgtcgcggtatgctcag 87
Query: 553 gcgctaaactgcctctgcaagacgctcaaatattaaaggaggcgccggaggaagtcatat 612
||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 88 gcgctaaactgcctctgcaagacgctcaagtactaaaggaggcgccagaggaagtcatat 147
Query: 613 ttagagctgggaagccagaattagttctggagtgtgctactgaagacaagagtcaagcac 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ttagagctgggaagccagaattagttctggagtgtgctactgaagacaagagtcaagcac 207
Query: 673 ccatacggtacagctggtttaaaaacgggcagcttttcgaaccgtctggtgaggtgagcc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccatacggtacagctggtttaaaaacgggcagcttttcgaaccgtctggtgaggtgagcc 267
Query: 733 agagagataacgaaggtacgcttgtgttcaaaaatcctaagaaagatgatgaaggaaaat 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agagagataacgaaggtacgcttgtgttcaaaaatcctaagaaagatgatgaaggaaaat 327
Query: 793 atcagtgcttcgctcagacagaggctggtacagccagcactagaatcattaacgtaaagc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atcagtgcttcgctcagacagaggctggtacagccagcactagaatcattaacgtaaagc 387
Query: 853 tcgcgttcattgacataccaaaagtaacactccagaaccacaaacccatcgaaggtaaat 912
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tcgctttcattgacataccaaaagtaacactccagaaccacaaacccatcgaaggtaaag 447
Query: 913 tataccaactggattgcgaaataccgaacagctatccgaaaccggaaatacagtggatct 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tataccaactggattgcgaaataccgaacagctatccgaaaccggaaatacagtggatct 507
Query: 973 atcaatccgtatccgatccgagcatatcaaggaatatcctagacaaacgtatcacgctat 1032
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 508 atcaatccgtatccgatccgagcatatcaaggaatatcctagataaacgtatcacgctat 567
Query: 1033 ctccgaatggtgtgctgtatttttctaacgtaacaaaggaagatacgagcgctgatcata 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctccgaatggtgtgctgtatttttctaacgtaacaaaggaagatacgagcgctgatcata 627
Query: 1093 aatacgtgtgtgttgcaaagacaccagcccacgatggtgacgtggtcttggcggaacacg 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aatacgtgtgtgttgcaaagacaccagcccacgatggtgacgtggtcttggcggaacacg 687
Query: 1153 tcatggaagacgtgcagcccagcagcgggtccaacagcgagctggtgctccaatatgtca 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tcatggaagacgtgcagcccagcagcgggtccaacagcgagctggtgctccaatatgtca 747
Query: 1213 gtaacgatattgtcggccaagttggaaaagtcactatgatatattgcatctatggcggaa 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gtaacgatattgtcggccaagttggaaaagtcactatgatatattgcatctatggcggaa 807
Query: 1273 ctcccctcgcccatcccgactggtacaaagatggcaagaacgtaaacaatagtcccaaag 1332
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctccactcgcccatcccgactggtacaaagatggcaagaacgtaaacaatagtcccaaag 867
Query: 1333 accgcgtcaccagatataaccggacagctgggaagaggctcctcatcaaggagacctggt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 accgcgtcaccagatataaccggacagctgggaagaggctcctcatcaaggagacctggt 927
Query: 1393 tagaggatgaagggaactacacctgcatcgtggacaatgaggtcggaaagcctcaagaac 1452
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 928 tagaggatgaagggaactacacctgcatcgtggacaatgaggtcgggaagcctcaagaac 987
Query: 1453 atacgatcagcgttcgcgtcgtcagtgcaccagagttcactaagaaaccggagccgaaag 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 atacgatcagcgttcgcgtcgtcagtgcaccagagttcactaagaaaccggagccgaaag 1047
Query: 1513 acagcactgtatccggcagggatgtgacgataccttgccaagttgcagcacttccggttg 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 acagcactgtatccggcagggatgtgacgataccttgccaagttgcagcacttccggttg 1107
Query: 1573 ccaagataacatggacttacaatgctaaaagtttacctgaaaacgacaaacttgtgattt 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ccaagataacatggacttacaatgctaaaagtttacctgaaaacgacaaacttgtgattt 1167
Query: 1633 cacaaacaacacaaggcaatatcacggtcgctgatttgaccatcaagaatgtccaaaact 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 cacaaacaacacaaggcaatatcacggtcgctgatttgaccatcaagaatgtccaaaact 1227
Query: 1693 ctgacaccggatattacggatgcagagccacaaatcaacatggcgatatctacgccgaaa 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 ctgacaccggatattacggatgcagagccacaaatcaacatggcgatatctacgccgaaa 1287
Query: 1753 cactgctga 1761
|||||||||
Sbjct: 1288 cactgctga 1296
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,895
Number of extensions: 5207
Number of successful extensions: 5207
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5207
Number of HSP's successfully gapped: 1
Length of query: 1880
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1863
Effective length of database: 8,119,229
Effective search space: 15126123627
Effective search space used: 15126123627
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)