BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00528 (UTR included)
(2575 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A2A02 1667 0.0
>BF01047A2A02
Length = 862
Score = 1667 bits (841), Expect = 0.0
Identities = 856/862 (99%)
Strand = Plus / Plus
Query: 480 tacgaacgtacgcgatcaaatatgactaaatatataatcttgttttacatcgtttcccag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacgaacgtacgcgatcaaatatgactaaatatataatcttgttttacatcgtttcccag 60
Query: 540 ttattcgcagcgcaaagttacaaaatactcggtatattcccatccgcagaccgtggcaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttattcgcagcgcaaagttacaaaatactcggtatattcccatccgcagaccgtggcaat 120
Query: 600 tatcaaacataccgtggattgttccgtcaactgacgcagcggaatcaccatgtgactctc 659
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 tatcaaacataccgtggattgttccgtcaactggcgcagcggaatcaccatgtgactctc 180
Query: 660 attacccatttccaaatgccaaacccgcctgtcaactatcatgaagttctacttaatgac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 attacccatttccaaatgccaaacccgcctgtcaactatcatgaagttctacttagtgac 240
Query: 720 aaacaagataataaaggcctgtcattcgaatcagttattgtgaatgaagtatcgcgtgtg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacaagataataaaggcctgtcattcgaatcagttattgtgaatgaagtatcgcgtgtg 300
Query: 780 ccgttcgaaactctggtatcaactaaagaaggaaacgatgattgcaaaacgctaatgaac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgttcgaaactctggtatcaactaaagaaggaaacgatgattgcaaaacgctaatgaac 360
Query: 840 aatcacgaggtactgcacatgataagaacgcaacctaaatattctgtgataatagtcgaa 899
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatcacgaggtactgcatatgataagaacgcaacctaaatattctgtgataatagtcgaa 420
Query: 900 tcatacaatagtgactgcgcccttgcgttggcggcaaatttaagttctccgtacatagcg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcatacaatagtgactgcgcccttgcgttggcggcaaatttaagttctccgtacatagcg 480
Query: 960 tttaatcctcagtcgatacacccttggcatttcagtagactaggaatacatttcaactca 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttaatcctcagtcgatacacccttggcatttcagtagactaggaatacatttcaactca 540
Query: 1020 gcttacgtcccccaatctctactgccgtttggaaaagaaccatggttttttgatagagtc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcttacgtcccccaatctctactgccgtttggaaaagaaccatggttttttgatagagtc 600
Query: 1080 aaaggttttatattgtaccacgtagcgaactgggtgtattatatcggttcgcaagtaacg 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaggttttatattgtaccacgtagcgaactgggtgtattatatcggttcgcaagtaacg 660
Query: 1140 gatcacgtgtacctctataaatatttaggggataatctaccagcgttggagagcatagcg 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatcacgtgtacctctataaatatttaggggataatctaccagcgttggagagcatagcg 720
Query: 1200 tcaaatgccagcctcgtgtttgtgaacacccacaaatctgttttcgggggtgtggtgcga 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaaatgccagcctcgtgtttgtgaacacccacaaatctgttttcgggggtgtggtgcga 780
Query: 1260 gctgataatgttgtcgacatcggaggaatacatatcagaccacccaaaagtatacctacg 1319
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 781 gctgataatgttgtcgacatcggaggaatacatatcagaccacccnnnagtatacctacg 840
Query: 1320 catatagaaagatttattaacg 1341
||||||||||||||||||||||
Sbjct: 841 catatagaaagatttattaacg 862
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,717
Number of extensions: 7119
Number of successful extensions: 7119
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7119
Number of HSP's successfully gapped: 1
Length of query: 2575
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2558
Effective length of database: 8,119,229
Effective search space: 20768987782
Effective search space used: 20768987782
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)