BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00531 (UTR included)
(2029 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B09 143 1e-33
BF14_729_C3 119 2e-26
BF01044B2E12 100 2e-20
BF01056A1B08 96 3e-19
BF01019B1G10 94 1e-18
BF01024A1H07 92 4e-18
BF01019A1H08 90 2e-17
BF01012A1E04 80 2e-14
BF01045B1C07 70 2e-11
BF01049B1F01 68 6e-11
BF14_335_C2 68 6e-11
>BF01012A1B09
Length = 841
Score = 143 bits (72), Expect = 1e-33
Identities = 82/84 (97%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 1892 ctgaaaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccgcgtagta 1951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ctgaaaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccgcgtagtg 765
Query: 1952 tatccgaaaatatattagtttcat 1975
|||||| |||||||||||||||||
Sbjct: 764 tatccg-aaatatattagtttcat 742
>BF14_729_C3
Length = 2041
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 1896 aaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccgcgtagtatatc 1955
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1617 aaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccgcgtagtatatc 1676
Query: 1956 cgaa 1959
||||
Sbjct: 1677 cgaa 1680
>BF01044B2E12
Length = 823
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1897 aagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccgcgtagtatatcc 1956
|||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||
Sbjct: 1 aagtaaccgaaacgtcgggattatgtagnnnttaaataataaaatccgcgtagtaaatcc 60
Query: 1957 gaaaatatattagtttcat 1975
||||| ||| |||||||||
Sbjct: 61 gaaaa-atactagtttcat 78
>BF01056A1B08
Length = 761
Score = 95.6 bits (48), Expect = 3e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 1892 ctgaaaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccgcgtagta 1951
|||||||| |||||||||||||||||| ||| ||||||||||||||||| |||| || |
Sbjct: 216 ctgaaaagcaaccgaaacgtcgggattgtgttgttttaaaataataaaaaacgcgcagca 157
Query: 1952 tatccgaaaatatattagtttcat 1975
| |||||||||||||||||||||
Sbjct: 156 cacccgaaaatatattagtttcat 133
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1925 ttttaaaataataaaatccgcgtagtatatccgaaaatatattagtttcat 1975
||||||||||||||||||||||| || ||||||| |||||||||||||||
Sbjct: 254 ttttaaaataataaaatccgcgtggtgtatccgaggatatattagtttcat 304
>BF01019B1G10
Length = 488
Score = 93.7 bits (47), Expect = 1e-18
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 1892 ctgaaaagtaaccgaaacgtcgggattatgtag-ttttaaaataataaaatccgcgtagt 1950
|||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 378 ctgaaaaggaaccgaaacgtcgggattatgtagtttttaaaataataaaattcgcgtagt 319
Query: 1951 atatccgaaaa 1961
| || ||||||
Sbjct: 318 aaatgcgaaaa 308
>BF01024A1H07
Length = 726
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1892 ctgaaaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccgcg 1946
||||||||||||||||||||| | ||||||||| |||||||||||||||||||||
Sbjct: 672 ctgaaaagtaaccgaaacgtcngnattatgtagntttaaaataataaaatccgcg 726
>BF01019A1H08
Length = 504
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 640 tgggtcacaagtccctggcattgttgaagctcctctccctgcaacgcgatggatccggcg 699
|||||| ||| |||| |||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 464 tgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgatggacccggca 405
Query: 700 cccgcacgg 708
|||||||||
Sbjct: 404 cccgcacgg 396
>BF01012A1E04
Length = 841
Score = 79.8 bits (40), Expect = 2e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1936 taaaatccgcgtagtatatccgaaaatatattagtttcat 1975
||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 taaaatccgcgtagtatatccgaaaatatattagtttcat 582
>BF01045B1C07
Length = 805
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1904 cgaaacgtcgggattatgtagttttaaaataataaaatccgcgtagt 1950
||||||||||||| |||||||||| ||||||||||||| ||||||||
Sbjct: 720 cgaaacgtcgggagtatgtagtttaaaaataataaaatacgcgtagt 766
>BF01049B1F01
Length = 840
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 640 tgggtcacaagtccctggcattgttgaagctcctctccctgcaacg 685
|||||| |||||||| |||| |||||||||||||||||||||||||
Sbjct: 632 tgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF14_335_C2
Length = 1827
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 651 tccctggcattgttgaagctcctctccctgcaacgcgatggatccggcgcccgcacgg 708
|||| |||| ||||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 897 tcccaggcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacgg 840
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,209
Number of extensions: 4643
Number of successful extensions: 4643
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 4641
Number of HSP's successfully gapped: 12
Length of query: 2029
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2012
Effective length of database: 8,119,229
Effective search space: 16335888748
Effective search space used: 16335888748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)