BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00594 (UTR included)
(1198 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 141 3e-33
BF14_335_C4 123 7e-28
BF14_335_C5 111 3e-24
BF14_335_C2 109 1e-23
BF01056B2D01 98 4e-20
BF01044B1A07 90 1e-17
BF01049B1F01 90 1e-17
BF01014B2F02 88 4e-17
BF01016B1E06 74 6e-13
>BF01019A1H08
Length = 504
Score = 141 bits (71), Expect = 3e-33
Identities = 101/111 (90%)
Strand = Plus / Minus
Query: 567 aacctacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaacgtgat 626
|||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||
Sbjct: 474 aacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgat 415
Query: 627 ggacccggcacccccacgttgaatccatggaatgctgagaagtttcatctc 677
||||||||||||| |||| ||||||||| ||||||| ||| ||||||||||
Sbjct: 414 ggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctc 364
>BF14_335_C4
Length = 1491
Score = 123 bits (62), Expect = 7e-28
Identities = 142/166 (85%), Gaps = 2/166 (1%)
Strand = Plus / Plus
Query: 502 taggtagggagaggagcttgaacggtggtggtcagcgtttaacgcgcgtaagacaggggc 561
||||||| |||||||||||| | || | ||| ||||||||| |||||||||| | |||
Sbjct: 1189 taggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaaggc 1248
Query: 562 acattaa-cctacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaa 620
| |||| ||||||||||||||||||||| |||||||||| |||||||||| |||||||
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaa 1307
Query: 621 cgtgatggacccggcacccccacgttgaatccatggaatgctgaga 666
|| ||||| ||| ||| || |||| |||||||||||||||||||||
Sbjct: 1308 cgcgatggtccccgcaaccgcacggtgaatccatggaatgctgaga 1353
>BF14_335_C5
Length = 1597
Score = 111 bits (56), Expect = 3e-24
Identities = 133/158 (84%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 503 aggtagggagaggagcttgaacggtggtggtcagcgtttaacgcgcgtaagacaggggca 562
|||||| |||||||||||| ||||||| ||| ||||||||| |||||| ||||||||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 563 catt-aacctacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaac 621
| || ||||||||| ||||||||| |||||||||| |||||||||||| |||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaa- 1556
Query: 622 gtgatggacccggcacccccacgttgaatccatggaat 659
|||| ||||||||||| |||| |||||||| |||||
Sbjct: 1557 -agatgcacccggcacccgcacggtgaatccacggaat 1593
>BF14_335_C2
Length = 1827
Score = 109 bits (55), Expect = 1e-23
Identities = 142/170 (83%), Gaps = 2/170 (1%)
Strand = Plus / Minus
Query: 510 gagaggagcttgaacggtggtggtcagcgttta--acgcgcgtaagacaggggcacatta 567
|||||||||||| ||||||| ||| |||||| ||||| || ||| |||||| | | |
Sbjct: 977 gagaggagcttggacggtggaggtgagcgttatgtacgcgagttagataggggctcttaa 918
Query: 568 acctacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaacgtgatg 627
||||||||||| ||||||| || |||||||||| |||||||||||||||||||| | |
Sbjct: 917 acctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcggcg 858
Query: 628 gacccggcacccccacgttgaatccatggaatgctgagaagtttcatctc 677
|||||||||||| |||| ||||||||| ||| ||| ||| ||||| ||||
Sbjct: 857 gacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctc 808
>BF01056B2D01
Length = 728
Score = 97.6 bits (49), Expect = 4e-20
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 592 aggcactgttaaagctcctctccctgcaacgtgatggacccggcacccccacgttgaatc 651
|||| ||||| |||||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 161 aggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaatt 102
Query: 652 catggaatgctgagaagtttc 672
||||||||| ||||| |||||
Sbjct: 101 catggaatgttgagaggtttc 81
>BF01044B1A07
Length = 806
Score = 89.7 bits (45), Expect = 1e-17
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 572 acacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaacgtgatggacc 631
|||||||| |||| |||| || ||| ||| |||||||||||||||| ||| ||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 632 cggcacccccacgttgaatccatggaatgctgagaagtttc 672
|| ||||| |||| ||||||||| ||| |||||||||||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgagaagtttc 432
>BF01049B1F01
Length = 840
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 502 taggtagggagaggagcttgaacggtggtggtcagcgtttaacgcgcgtaagacaggggc 561
||||||| |||||||||||| ||||| | ||| | |||||||| | || ||| |||| |
Sbjct: 707 taggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggcc 648
Query: 562 acattaacctacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaac 621
| | |||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 647 ccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaac 588
Query: 622 g 622
|
Sbjct: 587 g 587
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 4e-17
Identities = 92/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 571 tacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaacgtgatggac 630
||||||||||||||||||| |||| ||| | ||||||||||||||||||| | |||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaac--gctggac 566
Query: 631 ccggcacccccacgttgaatccatggaatgctgagaagtttcatctc 677
||||||||| |||| || ||||| ||||||||||| ||||| ||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
>BF01016B1E06
Length = 606
Score = 73.8 bits (37), Expect = 6e-13
Identities = 100/120 (83%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 502 taggtagggagaggagcttgaacggtggtggtcagcgtttaacgcgcgtaagacaggggc 561
||||||| |||||||| ||| ||||||| ||| ||||||||||||| | ||| |||| |
Sbjct: 310 taggtagagagaggagattggacggtggaggtgagcgtttaacgcg--ttagatagggcc 253
Query: 562 acattaacctacacctgggtcgcaagtcagaggcactgttaaagctcctctccctgcaac 621
| | |||||||||||||||||| | || ||||||||| ||||||||||| |||||||
Sbjct: 252 ccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaac 193
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,012
Number of extensions: 4176
Number of successful extensions: 4176
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 4169
Number of HSP's successfully gapped: 9
Length of query: 1198
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1181
Effective length of database: 8,119,229
Effective search space: 9588809449
Effective search space used: 9588809449
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)