BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00620 (UTR included)
(1393 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 82 3e-15
BF01025A1D01 80 1e-14
BF14_729_C2 78 4e-14
BF01012B1C01 76 2e-13
BF01035X1C09 74 7e-13
BF01017A2H11 74 7e-13
BF01011A1H06 74 7e-13
BF01014A1H02 72 3e-12
BF01005B1E12 72 3e-12
BF01024A1H07 72 3e-12
BF01058B2C06 70 1e-11
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 480 ctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcggga 528
||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcggga 1637
>BF01025A1D01
Length = 764
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 478 atctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcgggag 529
||||||||||||||||||||||| ||||| |||| |||||||||||||||||
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggag 434
>BF14_729_C2
Length = 1289
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 479 tctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcgggag 529
|||||||||||||||||||||| ||||| |||| |||||||||||||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggag 578
>BF01012B1C01
Length = 950
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 480 ctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcgggag 529
|||||||| |||||||||||| |||||||||| |||||||||||||||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggag 703
>BF01035X1C09
Length = 778
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 476 tcatctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcggga 528
||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 667 tcatctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgttggga 615
>BF01017A2H11
Length = 713
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 477 catctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcgggag 529
|||||||||||||||||||||||| ||||| |||| |||| ||||||||||||
Sbjct: 31 catctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcgggag 83
>BF01011A1H06
Length = 739
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 477 catctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcgggag 529
|||||||||||||||||||||||| | ||| |||| |||||||||||||||||
Sbjct: 458 catctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggag 510
>BF01014A1H02
Length = 787
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 476 tcatctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcggg 527
||||||||||||||||||||||||| ||||| |||| ||| |||||||||||
Sbjct: 251 tcatctcgtctgcccgtgatcacggttgctgtaaaggaacggaaacgtcggg 302
>BF01005B1E12
Length = 657
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 477 catctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcggga 528
||||||||||| |||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 301 catctcgtctggccgtgatcacggttgctgcaaagtaaccgaaacctcggga 352
>BF01024A1H07
Length = 726
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 477 catctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtc 524
|||||||||||||||||||||||| ||||| |||| ||||||||||||
Sbjct: 645 catctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtc 692
>BF01058B2C06
Length = 772
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 478 atctcgtctgcccgtgatcacggatgctgcaaagcaaccgaaacgtcggga 528
|||||||||| |||||||||||| ||| |||||| ||||||||||||||||
Sbjct: 483 atctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcggga 433
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 196,132
Number of extensions: 3975
Number of successful extensions: 3975
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3975
Number of HSP's successfully gapped: 11
Length of query: 1393
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1376
Effective length of database: 8,119,229
Effective search space: 11172059104
Effective search space used: 11172059104
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)