BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00627 (UTR included)
(1501 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_962_C1 999 0.0
>BF14_962_C1
Length = 864
Score = 999 bits (504), Expect = 0.0
Identities = 510/512 (99%)
Strand = Plus / Plus
Query: 487 ggcatagaaccaggatgaatatactacaggtgtgtgtgttagtttgtctctgtgtgagtg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggcatagaaccaggatgaatatactacaggtgtgtgtgttagtttgtctctgtgtgagtg 68
Query: 547 gcaattcccttccaccggataagatgcgtggatttcatataataaaaacaaggagcattg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcaattcccttccaccggataagatgcgtggatttcatataataaaaacaaggagcattg 128
Query: 607 atttgaataatgctcacggtcttgctatggagagtagattggagaaatctgtggaaccga 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atttgaataatgctcacggtcttgctatggagagtagattggagaaatctgtggaaccga 188
Query: 667 cgggttatcgtttggaattggagccgtatttggaagacgctatgttcaaagggcatgtta 726
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 189 cgggttatcgtttggaattggagccgtatttggaggacgctatgtttaaagggcatgtta 248
Query: 727 ggataaatgtgacgtggctagaagattctcatacaataaacgtccactgtgcccacgata 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggataaatgtgacgtggctagaagattctcatacaataaacgtccactgtgcccacgata 308
Query: 787 ttgaaatcactgagacggaagtacaggcgtatctatcaagcgattcagaacaattgcata 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttgaaatcactgagacggaagtacaggcgtatctatcaagcgattcagaacaattgcata 368
Query: 847 cgattcctatcaagagagtgaccatggatgtgaagaaaccaatcgctttaatacgacttg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cgattcctatcaagagagtgaccatggatgtgaagaaaccaatcgctttaatacgacttg 428
Query: 907 aaaaaacggtaccgaaatcttcaaaagggttcattgattttagtttcaaaggtaatatgc 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaaaaacggtaccgaaatcttcaaaagggttcattgattttagtttcaaaggtaatatgc 488
Query: 967 aaacggctatcacggaagcatttttcaaaact 998
||||||||||||||||||||||||||||||||
Sbjct: 489 aaacggctatcacggaagcatttttcaaaact 520
Score = 297 bits (150), Expect = 3e-80
Identities = 156/158 (98%)
Strand = Plus / Plus
Query: 1188 aggatagtcgcagggacacaactgcgtccgaataacgcgagacgtatgttcccatgtttt 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aggatagtcgcagggacacaactgcgtccgaataacgcgagacgtatgttcccatgtttt 607
Query: 1248 gatgaacctggatacaaaactccctttgaactgagcgtcgtgcgaccgagggatatggta 1307
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 608 gatgaacctggatacaaaactccctttgaactgagcgtcgtaagaccgagggatatggta 667
Query: 1308 gcacttagcaatgttcctgtcgctaggacagaagatat 1345
||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gcacttagcaatgttcctgtcgctaggacagaagatat 705
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,275
Number of extensions: 3975
Number of successful extensions: 3975
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3975
Number of HSP's successfully gapped: 2
Length of query: 1501
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1484
Effective length of database: 8,119,229
Effective search space: 12048935836
Effective search space used: 12048935836
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)