BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00635 (UTR included)
(2956 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2B08 1223 0.0
BF01037A1C05 729 0.0
>BF01060B2B08
Length = 750
Score = 1223 bits (617), Expect = 0.0
Identities = 629/633 (99%)
Strand = Plus / Plus
Query: 2324 cacacacatagtgtcggcgtctctgtgcgggtacactcccagcaagacctgcgcagacac 2383
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 cacacacatagtgtcggcgtctctgtgcgggtacactcccagcaagacctgcgcggacac 60
Query: 2384 gttcgtgctgggactggcgccgaggcgagccgctgaggagcatcaaggtcgacgaagatc 2443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttcgtgctgggactggcgccgaggcgagccgctgaggagcatcaaggtcgacgaagatc 120
Query: 2444 aggacacctctagtgatatacacatgcaaggcggctcgtaatatacatgtgaccttatca 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggacacctctagtgatatacacatgcaaggcggctcgtaatatacatgtgaccttatca 180
Query: 2504 taacagaacccacacggagcgaggcccttcagaacggttcggcggcgtgcggagacgagg 2563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taacagaacccacacggagcgaggcccttcagaacggttcggcggcgtgcggagacgagg 240
Query: 2564 acgacgagaggtcggaggacgtgcggccctgcggagccagcgacgcccgggcctggagcg 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgacgagaggtcggaggacgtgcggccctgcggagccagcgacgcccgggcctggagcg 300
Query: 2624 aggcccggacgcacaccgacctgctgttttgaagaacgccatcacggacgggcggggcag 2683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggcccggacgcacaccgacctgctgttttgaagaacgccatcacggacgggcggggcag 360
Query: 2684 aggcgtggagtcctgacacgcgacggaccgacgccggcgctgccgaccgccgggcgccaa 2743
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggcgtggagtcgtgatacgcgacggaccgacgccggcgctgccgaccgccgggcgccaa 420
Query: 2744 acatgtcaatagatattcatagaaaagccttatttttgtaagaatgttcgtcgacgacgt 2803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acatgtcaatagatattcatagaaaagccttatttttgtaagaatgttcgtcgacgacgt 480
Query: 2804 ctgctcaatattattattacatattatataagtacgtagcgagtagcgagtagcgagtag 2863
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 ctgctcaatattattattacatattatataagtacgtagcgagtagcgagtagcgggtag 540
Query: 2864 cgggtagcgggtagggagaagccggctccccgtgtggtggggacgaactgacaggttacg 2923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgggtagcgggtagggagaagccggctccccgtgtggtggggacgaactgacaggttacg 600
Query: 2924 acgcatgcgacgccgaaacacgcccgccgcccg 2956
|||||||||||||||||||||||||||||||||
Sbjct: 601 acgcatgcgacgccgaaacacgcccgccgcccg 633
>BF01037A1C05
Length = 777
Score = 729 bits (368), Expect = 0.0
Identities = 374/376 (99%)
Strand = Plus / Plus
Query: 2055 tctgaggaggagctgcggccctcgtccccgccgtctcctgtgagcgtgaagtttgttaac 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 49 tctgaggaggagctgcggccctcgtccccgccgtctcctgtgagcgtgaagttcgttaac 108
Query: 2115 gacaacgttctcatcaacggacgctcctccatcgcctcgcgaccgccgaacctcagcagg 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gacaacgttctcatcaacggacgctcctccatcgcctcgcgaccgccgaacctcagcagg 168
Query: 2175 acactaaagttgaagctgcagttcgacgactccctcacccgcaccttcgagtacccctcg 2234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 acactaaagttgaagctgcagttcgacgactccctcacccgcaccttcgagtacccctcg 228
Query: 2235 gagacttccctggcggaggacggcaccgcagcccctgcaacccccgcagcccccgcagcc 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gagacttccctggcggaggacggcaccgcagcccctgcaacccccgcagcccccgcagcc 288
Query: 2295 ccctcttcgcccggaacactcgccgccaacacacacatagtgtcggcgtctctgtgcggg 2354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccctcttcgcccggaacactcgccgccaacacacacatagtgtcggcgtctctgtgcggg 348
Query: 2355 tacactcccagcaagacctgcgcagacacgttcgtgctgggactggcgccgaggcgagcc 2414
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 349 tacactcccagcaagacctgcgcggacacgttcgtgctgggactggcgccgaggcgagcc 408
Query: 2415 gctgaggagcatcaag 2430
||||||||||||||||
Sbjct: 409 gctgaggagcatcaag 424
Score = 680 bits (343), Expect = 0.0
Identities = 349/351 (99%)
Strand = Plus / Plus
Query: 2508 agaacccacacggagcgaggcccttcagaacggttcggcggcgtgcggagacgaggacga 2567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agaacccacacggagcgaggcccttcagaacggttcggcggcgtgcggagacgaggacga 482
Query: 2568 cgagaggtcggaggacgtgcggccctgcggagccagcgacgcccgggcctggagcgaggc 2627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cgagaggtcggaggacgtgcggccctgcggagccagcgacgcccgggcctggagcgaggc 542
Query: 2628 ccggacgcacaccgacctgctgttttgaagaacgccatcacggacgggcggggcagaggc 2687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ccggacgcacaccgacctgctgttttgaagaacgccatcacggacgggcggggcagaggc 602
Query: 2688 gtggagtcctgacacgcgacggaccgacgccggcgctgccgaccgccgggcgccaaacat 2747
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 603 gtggagtcctgatacgcgacggacctacgccggcgctgccgaccgccgggcgccaaacat 662
Query: 2748 gtcaatagatattcatagaaaagccttatttttgtaagaatgttcgtcgacgacgtctgc 2807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gtcaatagatattcatagaaaagccttatttttgtaagaatgttcgtcgacgacgtctgc 722
Query: 2808 tcaatattattattacatattatataagtacgtagcgagtagcgagtagcg 2858
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tcaatattattattacatattatataagtacgtagcgagtagcgagtagcg 773
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,510
Number of extensions: 5859
Number of successful extensions: 5859
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5849
Number of HSP's successfully gapped: 3
Length of query: 2956
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2938
Effective length of database: 8,109,745
Effective search space: 23826430810
Effective search space used: 23826430810
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)