BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00638 (UTR included)
(2260 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2C11 1556 0.0
>BF01044A2C11
Length = 814
Score = 1556 bits (785), Expect = 0.0
Identities = 808/815 (99%), Gaps = 1/815 (0%)
Strand = Plus / Plus
Query: 853 cggtgtatctgactctaattgtgaccatagagcggtgggtagccgtctgccatccttttc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggtgtatctgactctaattgtgaccatagagcggtgggtagccgtctgccatccttttc 60
Query: 913 gagcgaaggcactctgtacgtcttctcgagctcgctggtacgtattgggaacggcaacct 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcgaaggcactctgtacgtcttctcgagctcgctggtacgtattgggaacggcaacct 120
Query: 973 tcgctttcgcctacaatgccccaaaatttttcgaggccgaggttatagcggaaggcaatc 1032
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 tcgctttcgcctacaatgccccaaaatttttcgaggcagaggttatagcggaaggcaatc 180
Query: 1033 ccgagagcggcgaagttatatattgcgtgagagcagacatgaacttccgcaccgatagat 1092
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgagagcggcgaagttatatactgcgtgagagcagacatgaacttccgcaccgatagat 240
Query: 1093 atgtggtggtttatatccattggatgtatttagtagtcatgtacatagtacctttttctg 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgtggtggtttatatccattggatgtatttagtagtcatgtacatagtacctttttctg 300
Query: 1153 ccctagcggctttaaacgcctgtatcgtcaaacaagtacgccgggcccaagcggaacgag 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 ccctagcggctttaaacgcctgtatcgtcaaacaagtacgccgggcccaagcggagcgag 360
Query: 1213 ctcgtttgtctcgtgttcaacgacgagagctcgggctggccacaatgctgcttgtggtag 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcgtttgtctcgtgttcaacgacgagagctcgggctggccacaatgctgcttgtggtag 420
Query: 1273 tgctggtgttctttctctgtaacctgttaccgctcgttacgaatgcttttgaagtatttc 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgctggtgttctttctctgtaacctgttaccgctcgttacgaatgcttttgaagtatttc 480
Query: 1333 tcggagacgccttcgaaaatctggatccactggtgaaaacaagcaaccttttagtaacga 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcggagacgccttcgaaaatctggatccactggtgaaaacaagcaaccttttagtaacga 540
Query: 1393 taaatagtagtgtcaactttgtgatatacgttatattcggcgagaaatttaaacgggtgt 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taaatagtagtgtcaactttgtgatatacgttatattcggcgagaaatttaaacgggtgt 600
Query: 1453 ttctaaaaatattttgcgcgggaagaatacgcccgcggggtttgagagattctccggaac 1512
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 601 ttctaaaaatattttgcgcgggaagaatacgcccgcggggcttgagagattctccggaac 660
Query: 1513 acacgcgagacgattcgtttgcatcgtgtggagagcggatgtcgctgcgtctggcacgga 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acacgcgagacgattcgtttgcatcgtgtggagagcggatgtcgctgcgtctggcacgga 720
Query: 1573 acggaacattacggcgctcagatctccgcagcacgcgcaccggtcccggtcgacagcgtc 1632
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acggaacattacggcgctcnnatctccgcagcacgcgcaccggtcccggtcgacagcgtc 780
Query: 1633 gcgcagcttcaccagcacccaccgtctactacccg 1667
||||||||||| |||||||||||||||||||||||
Sbjct: 781 gcgcagcttca-cagcacccaccgtctactacccg 814
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,962
Number of extensions: 6143
Number of successful extensions: 6143
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6142
Number of HSP's successfully gapped: 1
Length of query: 2260
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2243
Effective length of database: 8,119,229
Effective search space: 18211430647
Effective search space used: 18211430647
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)