BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00652 (UTR included)
(2380 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1E05 1021 0.0
BF01015A2F07 928 0.0
>BF01022B1E05
Length = 609
Score = 1021 bits (515), Expect = 0.0
Identities = 553/568 (97%)
Strand = Plus / Plus
Query: 495 aaaaaaatgcataagatactagaatttcaagcagtcgtgttggcggcgggacgaggatct 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 aaaaaaatgcataagatactagaatttcaagcagtcgtgttggcggcgggacgaggatct 101
Query: 555 cgcatgcctgatgtaggaggaacagtgtctaaatgtctcttacctgttggtccatatcct 614
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 102 cgcatgcctgatgtaggaggaacagtgtctaaatgtctcttgcctgttggtccatatcct 161
Query: 615 gtactatggtattcattaaacatgttagaaaagtttggatttcaagaaaccatgttggtt 674
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gtgctatggtattcattaaatatgttagaaaagtttggatttcaagaaaccatgttggtt 221
Query: 675 gtattggatgaagataaatctaacatcattaatgcactcgaaaaatgcccattgaaaatc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gtattggatgaagataaatctaacatcattaatgcactcgaaaaatgcccattgaaaatc 281
Query: 735 aaatacgacttgattgttattccatcagaagaagattggggtactgctaactctcttaaa 794
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 282 aaatacgacttgattgttattccatcagaagaagattggggtacggctaactctctgaaa 341
Query: 795 catgttagtagtaaagtgaacacagatcttataatagtctcaggagatctcataaccaac 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 catgttagtagtaaagtgaacacagatcttataatagtctcaggagatctcataaccaac 401
Query: 855 ataaatttaaatgatgtattaaacctttaccgaaaacatgatgcagctcttgctacactc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ataaatttaaatgatgtattaaacctttaccgaaaacatgatgcagctcttgctacactc 461
Query: 915 ttcttcaacaatggcccagaagaatggattgaattacctggacttaaaactaaagccaaa 974
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 462 ttcttcaacaatggcccagaagaatggattgaattacctggacttannnctaaagccaaa 521
Query: 975 ccagatcgagatttagtttgcatagacaaagaaacagaaagattagtttttcttgccagt 1034
|||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 522 ccagatcgggatttnnnttgcatagacaaagaaacagaaagattnagttttcttgccagt 581
Query: 1035 gctagtgattttgaagaaaatgtcacaa 1062
||||||||||||||||||||||||||||
Sbjct: 582 gctagtgattttgaagaaaatgtcacaa 609
Score = 71.9 bits (36), Expect = 4e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 353 ttaaattgaaaattttaaacaaattataatttaaag 388
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaattgaaaattttaaacaaattataatttaaag 36
>BF01015A2F07
Length = 531
Score = 928 bits (468), Expect = 0.0
Identities = 480/484 (99%)
Strand = Plus / Plus
Query: 1343 aatgtcagcttacaatgatcataccttaggaagtaaaggtgtttactataatgatacttt 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 aatgtcagcttacaatgatcataccttaggaagtaaaggtgtttactataatgatacttt 96
Query: 1403 gcggtgctatgcccatatacccgataaaaatacttttggtatccgagtgaacacattatc 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gcggtgctatgcccatatacccgataaaaatacttttggtatccgagtgaacacattatc 156
Query: 1463 tgcattgtacttgtctaacagcaagatactatcaaaatggcaagaaataacaggaacaga 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tgcattgtacttgtctaacagcaagatactatcaaaatggcaagaaataacaggaacaga 216
Query: 1523 actattagagaggatacatcctaacagtgaagttagcacaaaacaaattgatgaaaactg 1582
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 217 actattagagaggatacatcctaacagtgaagttagcacaaaacaaatcgatgaaaactg 276
Query: 1583 tacagtcggagaaaaaagttgcattagtgagaagacatcattaaaaagcacattcattgg 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tacagtcggagaaaaaagttgcattagtgagaagacatcattaaaaagcacattcattgg 336
Query: 1643 tagtaattgcaccatcgaaaacaaagtcagattaaccaattgcatattaatgaataatgt 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tagtaattgcaccatcgaaaacaaagtcagattaaccaattgcatattaatgaataatgt 396
Query: 1703 caccgtcaaagaaggatgtgttctccaagactgtatattatatacgggtgtaacagtaga 1762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 397 caccgtcaaagaaggatgtgttctccaagactgtatattatatacgggtgtaacagtgga 456
Query: 1763 tgtgaattgcaacctacaatactgcattgttgggccacatcacgttgtgtcgtcatcgaa 1822
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgtgaattgcaacttgcaatactgcattgttgggccacatcacgttgtgtcgtcatcgaa 516
Query: 1823 aaaa 1826
||||
Sbjct: 517 aaaa 520
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 333,749
Number of extensions: 6748
Number of successful extensions: 6748
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6748
Number of HSP's successfully gapped: 3
Length of query: 2380
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2363
Effective length of database: 8,119,229
Effective search space: 19185738127
Effective search space used: 19185738127
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)