BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00656 (UTR included)
(947 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3521_C1 611 e-175
>BF14_3521_C1
Length = 840
Score = 611 bits (308), Expect = e-175
Identities = 325/330 (98%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 350 aacttctgttcgtattgaatttggttatatttcggaaatttaaaaataattcaatacac- 408
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 aacttctgttcgtattgaatttggttatatttcggaattttaaaaataattcaatacnnn 61
Query: 409 tttttgtcaaaagacagaactataatcttatgcttttaataatcgcacaataatatgcaa 468
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttttgtcaaaagacaggactataatcttatgcttttaataatcgcacaataatatgcaa 121
Query: 469 aagtgacttattaattcataaatattgaaataatggcggacagagatctctctttaggtc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagtgacttattaattcataaatattgaaataatggcggacagagatctctctttaggtc 181
Query: 529 ctcgggatggagttacttacccaataagagtacagtattgcggtaattgttcgatgccaa 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctcgggatggagttacttacccaataagagtacagtattgcggtaattgttcgatgccaa 241
Query: 589 tagaatattgtgaatattatcctgaatatgataaatgcaaacaatggctcgaaaagaatc 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tagaatattgtgaatattatcctgaatatgataaatgcaaacaatggctcgaaaagaatc 301
Query: 649 ttccgactgaatttgaaaaagtcaagatag 678
||||||||||||||||||||||||||||||
Sbjct: 302 ttccgactgaatttgaaaaagtcaagatag 331
Score = 337 bits (170), Expect = 2e-92
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 676 tagacgaggatgacaatgccggtggagaggaagaaaagaaaagacagaaaagaggtggca 735
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tagacgaggatgacaatgctggtggagaggaagaaaagaaaagacagaaaagaggtggca 455
Query: 736 agggcatgttaaaatcaaagaaaaaggaagatgttccaaaactggtgcaagtatctagag 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agggcatgttaaaatcaaagaaaaaggaagatgttccaaaactggtgcaagtatctagag 515
Query: 796 ccccccgtggtaaaaagaaatcagttactgtagtgtcaggactgagtacatttg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccccccgtggtaaaaagaaatcagttactgtagtgtcaggactgagtacatttg 569
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 156,115
Number of extensions: 3568
Number of successful extensions: 3568
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3567
Number of HSP's successfully gapped: 2
Length of query: 947
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 930
Effective length of database: 8,119,229
Effective search space: 7550882970
Effective search space used: 7550882970
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)