BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00661 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1A01 1451 0.0
BF01033A1B02 785 0.0
>BF01034B1A01
Length = 751
Score = 1451 bits (732), Expect = 0.0
Identities = 745/751 (99%)
Strand = Plus / Plus
Query: 734 atgcgatcctaacgatagaccagatgatgatttaccaaagaaaatcccacttaattggtt 793
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 atgcgatcctaacgatagaccagatgatgatttaccnnngaaaatcccacttaattggtt 60
Query: 794 gtcagatggacaagaaattaaggtagaaggtgcaacagtaaaggtgcaccacacaccagg 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcagatggacaagaaattaaggtagaaggtgcaacagtaaaggtgcaccacacaccagg 120
Query: 854 acacacgacagatcatgtggtacttatgttaatggaagagaatatactctttagtggtga 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acacacgacagatcatgtggtacttatgttaatggaagagaatatactctttagtggtga 180
Query: 914 ttgcatactcggtgaggggacagctgtgtttgaagatttatatacttatatgaaaagtct 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcatactcggtgaggggacagctgtgtttgaagatttatatacttatatgaaaagtct 240
Query: 974 acaaaaaattctagacctgaatcctggaacaatatatcccggccatggaaatgttgttga 1033
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 acaaaaaattctagacctgaatcctggaacaatatatcccggacatggaaatgttgttga 300
Query: 1034 tgatcccatagaaaaaattcaatattacattgctcacagaaatcagagagaggaacaaat 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatcccatagaaaaaattcaatattacattgctcacagaaatcagagagaggaacaaat 360
Query: 1094 tcttgaaactttaaggaataattctgataaacaattaaatgaaatggatttggtgcaatt 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttgaaactttaaggaataattctgataaacaattaaatgaaatggatttggtgcaatt 420
Query: 1154 gatatacactgagaccccggaacatctttgggctgctgctgcttacaacgttaaccatca 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatatacactgagaccccggaacatctttgggctgctgctgcttacaacgttaaccatca 480
Query: 1214 tttaacaaaactaaccaaagagaataaaataaaaagtataaatagagatggtgaaacaag 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttaacaaaactaaccaaagagaataaaataaaaagtataaatagagatggtgaaacaag 540
Query: 1274 atggcagtatgtagttgtgcaaagtaacttgtaatgtcattttattggcattataaatga 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggcagtatgtagttgtgcaaagtaacttgtaatgtcattttattggcattataaatga 600
Query: 1334 tggcccactattgtttctgttgaatcattaaataaatttacagcctttattaggtatata 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggcccactattgtttctgttgaatcattaaataaatttacagcctttattaggtatata 660
Query: 1394 atttttttgggtcttaataaaacagctcttcattggataaccgagtttattacacttata 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atttttttgggtcttaataaaacagctcttcattggataaccgagtttattacacttata 720
Query: 1454 ttattatatttaacacttgcggtatccaatt 1484
|||||||||||||||||||||||||||||
Sbjct: 721 nnattatatttaacacttgcggtatccaatt 751
>BF01033A1B02
Length = 408
Score = 785 bits (396), Expect = 0.0
Identities = 404/408 (99%)
Strand = Plus / Plus
Query: 299 taactcctctagatttattttgaaaataaaataatagctcagtactcgataaatacctga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taactcctctagatttattttgaaaataaaataatagctcagtactcgataaatacctga 60
Query: 359 agtaaccgcaacagttattggtctcttaaaataatcttcttttgaaccattaagagaata 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtaaccgcaacagttattggtctcttaaaataatcttcttttgaaccattaagagaata 120
Query: 419 ttttataatggcagccgcaattcctgctattactaaattgtctagcaggatcataagaat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttataatggcagccgcaattcctgctattactaaattgtctagcaggatcataagaat 180
Query: 479 tctcggctgtaaccctgggcctatgacattacaaggtactaatacttatttaattggaac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctcggctgtaaccctgggcctatgacattacaaggtactaatacttatttaattggaac 240
Query: 539 aggaaaaaaccgcatcctacttgacgcgggtgacaaaaatgttggagaatatcaaaaaca 598
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 aggaaaaaaccgcatcctacttgacgcgggtgacaaaaatgttggnnnntatcaaaaaca 300
Query: 599 tttatcagatgtggttaattctgaacaactgaatatagaacacatagttgtgacacattg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttatcagatgtggttaattctgaacaactgaatatagaacacatagttgtgacacattg 360
Query: 659 gcatcatgatcacattggtggggttgaaaatttatatgggtctatcgc 706
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcatcatgatcacattggtggggttgaaaatttatatgggtctatcgc 408
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,338
Number of extensions: 6851
Number of successful extensions: 6851
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6851
Number of HSP's successfully gapped: 2
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)